Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.21□□□□□ -0.61
Pif1Q80SX8 Gm11941-201ENSMUST00000119904 610 ntBASIC11.21□□□□□ -0.61
Pif1Q80SX8 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Gm12196-201ENSMUST00000120954 262 ntBASIC11.21□□□□□ -0.61
Pif1Q80SX8 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Pif1Q80SX8 AC153936.1-201ENSMUST00000219874 395 ntBASIC11.21□□□□□ -0.61
Pif1Q80SX8 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.21□□□□□ -0.61
Pif1Q80SX8 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Gm5455-201ENSMUST00000058710 715 ntBASIC11.21□□□□□ -0.61
Pif1Q80SX8 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pif1Q80SX8 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pif1Q80SX8 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Pif1Q80SX8 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pif1Q80SX8 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.21□□□□□ -0.62
Pif1Q80SX8 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pif1Q80SX8 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pif1Q80SX8 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pif1Q80SX8 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
Pif1Q80SX8 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pif1Q80SX8 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.21□□□□□ -0.62
Pif1Q80SX8 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Pif1Q80SX8 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.2□□□□□ -0.62
Pif1Q80SX8 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.2□□□□□ -0.62
Pif1Q80SX8 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Gm23596-201ENSMUST00000104304 132 ntBASIC11.2□□□□□ -0.62
Pif1Q80SX8 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Gm807-202ENSMUST00000224929 408 ntBASIC11.2□□□□□ -0.62
Pif1Q80SX8 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.2□□□□□ -0.62
Pif1Q80SX8 AC125117.2-201ENSMUST00000228344 1140 ntBASIC11.2□□□□□ -0.62
Pif1Q80SX8 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Gm26035-201ENSMUST00000083065 308 ntBASIC11.2□□□□□ -0.62
Pif1Q80SX8 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Pif1Q80SX8 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.2□□□□□ -0.62
Pif1Q80SX8 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Btk-202ENSMUST00000113213 2121 ntTSL 5 BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pif1Q80SX8 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.19□□□□□ -0.62
Pif1Q80SX8 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms