Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 Gm11511-201ENSMUST00000118146 540 ntBASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 Gm9022-201ENSMUST00000182482 992 ntBASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 Gm18893-201ENSMUST00000198416 943 ntBASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox11Q7M6Y2 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Sox11Q7M6Y2 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sox11Q7M6Y2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox11Q7M6Y2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox11Q7M6Y2 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox11Q7M6Y2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Sox11Q7M6Y2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox11Q7M6Y2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.21□□□□□ -0.46
Sox11Q7M6Y2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox11Q7M6Y2 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.21□□□□□ -0.46
Sox11Q7M6Y2 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sox11Q7M6Y2 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Sox11Q7M6Y2 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Gm28324-201ENSMUST00000187913 264 ntBASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Gm34023-201ENSMUST00000195539 217 ntBASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.2□□□□□ -0.46
Sox11Q7M6Y2 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox11Q7M6Y2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox11Q7M6Y2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox11Q7M6Y2 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox11Q7M6Y2 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.19□□□□□ -0.46
Sox11Q7M6Y2 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox11Q7M6Y2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.19□□□□□ -0.46
Sox11Q7M6Y2 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox11Q7M6Y2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox11Q7M6Y2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox11Q7M6Y2 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox11Q7M6Y2 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox11Q7M6Y2 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms