Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Gm24954-201ENSMUST00000178831 110 ntBASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Gm6114-201ENSMUST00000182472 968 ntBASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slx4Q6P1D7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Gm6630-201ENSMUST00000119199 454 ntBASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Gm25226-201ENSMUST00000158198 123 ntBASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Gm25677-201ENSMUST00000174983 72 ntBASIC18.16■□□□□ 0.5
Slx4Q6P1D7 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Gm37782-201ENSMUST00000194879 678 ntBASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Arhgef33-210ENSMUST00000225548 456 ntBASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Gm5468-202ENSMUST00000227851 682 ntBASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.16■□□□□ 0.5
Slx4Q6P1D7 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Gm20495-201ENSMUST00000173902 235 ntBASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC18.15■□□□□ 0.5
Slx4Q6P1D7 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Gm26670-202ENSMUST00000226862 340 ntBASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Mir326-201ENSMUST00000083637 95 ntBASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slx4Q6P1D7 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Slx4Q6P1D7 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.5
Slx4Q6P1D7 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Slx4Q6P1D7 Gm1840-201ENSMUST00000051687 1432 ntBASIC18.14■□□□□ 0.5
Slx4Q6P1D7 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Slx4Q6P1D7 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Slx4Q6P1D7 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slx4Q6P1D7 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slx4Q6P1D7 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Slx4Q6P1D7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms