Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Gm11439-201ENSMUST00000118598 409 ntBASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Gm13492-201ENSMUST00000119772 665 ntBASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Gm7029-201ENSMUST00000173226 450 ntBASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Gm43002-201ENSMUST00000200310 155 ntBASIC12.29□□□□□ -0.44
Krt42Q6IFX2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Gm7287-201ENSMUST00000205267 602 ntBASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Gm10254-201ENSMUST00000052888 867 ntBASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Krt42Q6IFX2 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Krt42Q6IFX2 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Krt42Q6IFX2 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.27□□□□□ -0.44
Krt42Q6IFX2 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.27□□□□□ -0.44
Krt42Q6IFX2 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Krt42Q6IFX2 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.27□□□□□ -0.44
Krt42Q6IFX2 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Krt42Q6IFX2 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Krt42Q6IFX2 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Krt42Q6IFX2 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Krt42Q6IFX2 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Krt42Q6IFX2 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Krt42Q6IFX2 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Krt42Q6IFX2 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.27□□□□□ -0.44
Krt42Q6IFX2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Krt42Q6IFX2 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Krt42Q6IFX2 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.27□□□□□ -0.44
Krt42Q6IFX2 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Krt42Q6IFX2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Krt42Q6IFX2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Krt42Q6IFX2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Krt42Q6IFX2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Krt42Q6IFX2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Krt42Q6IFX2 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Krt42Q6IFX2 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.27□□□□□ -0.45
Krt42Q6IFX2 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.27□□□□□ -0.45
Krt42Q6IFX2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.27□□□□□ -0.45
Krt42Q6IFX2 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.27□□□□□ -0.45
Krt42Q6IFX2 Gm22058-201ENSMUST00000083393 310 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms