Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Zfp248Q640N4 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Zfp248Q640N4 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Zfp248Q640N4 Gm45428-201ENSMUST00000209619 1789 ntBASIC9.15□□□□□ -0.94
Zfp248Q640N4 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC9.15□□□□□ -0.94
Zfp248Q640N4 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Zfp248Q640N4 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Zfp248Q640N4 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Zfp248Q640N4 Gm22018-201ENSMUST00000104357 131 ntBASIC9.15□□□□□ -0.94
Zfp248Q640N4 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
Zfp248Q640N4 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Zfp248Q640N4 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC9.15□□□□□ -0.94
Zfp248Q640N4 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Zfp248Q640N4 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC9.15□□□□□ -0.94
Zfp248Q640N4 Gm25043-201ENSMUST00000158604 212 ntBASIC9.15□□□□□ -0.94
Zfp248Q640N4 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC9.15□□□□□ -0.94
Zfp248Q640N4 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC9.15□□□□□ -0.94
Zfp248Q640N4 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Zfp248Q640N4 Mospd4-201ENSMUST00000180618 576 ntBASIC9.15□□□□□ -0.94
Zfp248Q640N4 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Zfp248Q640N4 Gm9728-201ENSMUST00000200197 1055 ntBASIC9.15□□□□□ -0.94
Zfp248Q640N4 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Zfp248Q640N4 Gm7619-201ENSMUST00000210649 1282 ntBASIC9.15□□□□□ -0.94
Zfp248Q640N4 Gm17823-201ENSMUST00000217830 1006 ntBASIC9.15□□□□□ -0.94
Zfp248Q640N4 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.15□□□□□ -0.94
Zfp248Q640N4 AC140406.1-201ENSMUST00000226481 465 ntBASIC9.15□□□□□ -0.94
Zfp248Q640N4 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Zfp248Q640N4 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Zfp248Q640N4 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Zfp248Q640N4 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Zfp248Q640N4 Gm19692-201ENSMUST00000203856 2084 ntBASIC9.15□□□□□ -0.94
Zfp248Q640N4 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Zfp248Q640N4 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Zfp248Q640N4 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Zfp248Q640N4 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Zfp248Q640N4 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Zfp248Q640N4 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Zfp248Q640N4 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Zfp248Q640N4 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC9.15□□□□□ -0.95
Zfp248Q640N4 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Zfp248Q640N4 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Zfp248Q640N4 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Zfp248Q640N4 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Zfp248Q640N4 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Zfp248Q640N4 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Zfp248Q640N4 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Zfp248Q640N4 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Gm43267-201ENSMUST00000199664 1796 ntBASIC9.14□□□□□ -0.95
Zfp248Q640N4 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC9.14□□□□□ -0.95
Zfp248Q640N4 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Gm8801-201ENSMUST00000173255 1064 ntBASIC9.14□□□□□ -0.95
Zfp248Q640N4 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Gm19963-201ENSMUST00000208413 1255 ntBASIC9.14□□□□□ -0.95
Zfp248Q640N4 AC133598.1-201ENSMUST00000224327 660 ntBASIC9.14□□□□□ -0.95
Zfp248Q640N4 AC140451.2-201ENSMUST00000228030 664 ntBASIC9.14□□□□□ -0.95
Zfp248Q640N4 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms