Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.04□□□□□ -0.64
Cd47Q61735 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cd47Q61735 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cd47Q61735 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.04□□□□□ -0.64
Cd47Q61735 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.04□□□□□ -0.64
Cd47Q61735 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.04□□□□□ -0.64
Cd47Q61735 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Gm37629-201ENSMUST00000193635 1050 ntBASIC11.04□□□□□ -0.64
Cd47Q61735 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.04□□□□□ -0.64
Cd47Q61735 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Cd47Q61735 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.04□□□□□ -0.64
Cd47Q61735 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.04□□□□□ -0.64
Cd47Q61735 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cd47Q61735 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd47Q61735 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.04□□□□□ -0.64
Cd47Q61735 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.04□□□□□ -0.64
Cd47Q61735 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cd47Q61735 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.03□□□□□ -0.64
Cd47Q61735 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.03□□□□□ -0.64
Cd47Q61735 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cd47Q61735 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.03□□□□□ -0.64
Cd47Q61735 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Gm4034-201ENSMUST00000187674 480 ntBASIC11.03□□□□□ -0.64
Cd47Q61735 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.03□□□□□ -0.64
Cd47Q61735 Gm38247-201ENSMUST00000194675 433 ntBASIC11.03□□□□□ -0.64
Cd47Q61735 Gm44958-201ENSMUST00000203734 736 ntBASIC11.03□□□□□ -0.64
Cd47Q61735 Gm9520-201ENSMUST00000209460 1253 ntBASIC11.03□□□□□ -0.64
Cd47Q61735 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.03□□□□□ -0.64
Cd47Q61735 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Cd47Q61735 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Gm10076-201ENSMUST00000073238 384 ntBASIC11.03□□□□□ -0.64
Cd47Q61735 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.03□□□□□ -0.64
Cd47Q61735 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cd47Q61735 Gm45657-201ENSMUST00000211318 1349 ntBASIC11.03□□□□□ -0.64
Cd47Q61735 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Cd47Q61735 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.03□□□□□ -0.64
Cd47Q61735 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.03□□□□□ -0.64
Cd47Q61735 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd47Q61735 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Cd47Q61735 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.02□□□□□ -0.64
Cd47Q61735 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Cd47Q61735 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Cd47Q61735 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cd47Q61735 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Cd47Q61735 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cd47Q61735 Gm18719-201ENSMUST00000196696 1413 ntBASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms