Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cln3Q61124 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cln3Q61124 Gm14942-201ENSMUST00000119642 336 ntBASIC13.17□□□□□ -0.3
Cln3Q61124 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.17□□□□□ -0.3
Cln3Q61124 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.17□□□□□ -0.3
Cln3Q61124 Gm8459-201ENSMUST00000162504 760 ntBASIC13.17□□□□□ -0.3
Cln3Q61124 Gm6407-201ENSMUST00000176468 549 ntBASIC13.17□□□□□ -0.3
Cln3Q61124 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cln3Q61124 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cln3Q61124 Gm8342-201ENSMUST00000209839 757 ntBASIC13.17□□□□□ -0.3
Cln3Q61124 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.17□□□□□ -0.3
Cln3Q61124 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.17□□□□□ -0.3
Cln3Q61124 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cln3Q61124 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cln3Q61124 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cln3Q61124 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cln3Q61124 Olfr584-201ENSMUST00000098210 964 ntBASIC13.17□□□□□ -0.3
Cln3Q61124 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cln3Q61124 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cln3Q61124 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cln3Q61124 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cln3Q61124 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cln3Q61124 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cln3Q61124 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cln3Q61124 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cln3Q61124 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cln3Q61124 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cln3Q61124 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cln3Q61124 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cln3Q61124 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Cln3Q61124 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cln3Q61124 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cln3Q61124 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cln3Q61124 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cln3Q61124 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.16□□□□□ -0.3
Cln3Q61124 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.16□□□□□ -0.3
Cln3Q61124 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC13.16□□□□□ -0.3
Cln3Q61124 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.16□□□□□ -0.3
Cln3Q61124 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC13.16□□□□□ -0.3
Cln3Q61124 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13.16□□□□□ -0.3
Cln3Q61124 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.16□□□□□ -0.3
Cln3Q61124 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 Gm44953-201ENSMUST00000208745 1286 ntBASIC13.16□□□□□ -0.3
Cln3Q61124 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC13.16□□□□□ -0.3
Cln3Q61124 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC13.16□□□□□ -0.3
Cln3Q61124 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Cln3Q61124 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cln3Q61124 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cln3Q61124 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cln3Q61124 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cln3Q61124 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cln3Q61124 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cln3Q61124 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Cln3Q61124 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cln3Q61124 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cln3Q61124 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cln3Q61124 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cln3Q61124 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Cln3Q61124 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cln3Q61124 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cln3Q61124 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cln3Q61124 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.15□□□□□ -0.3
Cln3Q61124 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cln3Q61124 Gm14201-201ENSMUST00000117627 289 ntBASIC13.15□□□□□ -0.3
Cln3Q61124 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cln3Q61124 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cln3Q61124 Gm9192-201ENSMUST00000183221 985 ntBASIC13.15□□□□□ -0.3
Cln3Q61124 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC13.15□□□□□ -0.3
Cln3Q61124 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cln3Q61124 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.15□□□□□ -0.3
Cln3Q61124 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
Cln3Q61124 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cln3Q61124 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.15□□□□□ -0.3
Cln3Q61124 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.15□□□□□ -0.3
Cln3Q61124 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Cln3Q61124 Gm45594-201ENSMUST00000211717 241 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms