Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Gm11989-201ENSMUST00000117240 672 ntBASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Gm11362-201ENSMUST00000118838 850 ntBASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim38Q5SZ99 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Gm27046-201ENSMUST00000182160 463 ntBASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Gm38266-201ENSMUST00000194931 421 ntBASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim38Q5SZ99 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms