Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38aQ4FK66 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38aQ4FK66 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38aQ4FK66 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Prpf38aQ4FK66 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38aQ4FK66 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38aQ4FK66 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38aQ4FK66 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38aQ4FK66 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38aQ4FK66 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf38aQ4FK66 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf38aQ4FK66 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf38aQ4FK66 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf38aQ4FK66 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf38aQ4FK66 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.02□□□□□ -0.16
Prpf38aQ4FK66 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf38aQ4FK66 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf38aQ4FK66 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf38aQ4FK66 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf38aQ4FK66 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf38aQ4FK66 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf38aQ4FK66 Gm15207-201ENSMUST00000119259 442 ntBASIC14.02□□□□□ -0.17
Prpf38aQ4FK66 Gm13263-201ENSMUST00000121271 838 ntBASIC14.02□□□□□ -0.17
Prpf38aQ4FK66 Gm8815-201ENSMUST00000173809 620 ntBASIC14.02□□□□□ -0.17
Prpf38aQ4FK66 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Prpf38aQ4FK66 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf38aQ4FK66 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.02□□□□□ -0.17
Prpf38aQ4FK66 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC14.02□□□□□ -0.17
Prpf38aQ4FK66 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.02□□□□□ -0.17
Prpf38aQ4FK66 CT009718.3-201ENSMUST00000221116 367 ntBASIC14.02□□□□□ -0.17
Prpf38aQ4FK66 AC134860.1-201ENSMUST00000224867 660 ntBASIC14.02□□□□□ -0.17
Prpf38aQ4FK66 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf38aQ4FK66 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf38aQ4FK66 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Prpf38aQ4FK66 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.02□□□□□ -0.17
Prpf38aQ4FK66 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf38aQ4FK66 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf38aQ4FK66 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf38aQ4FK66 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf38aQ4FK66 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.02□□□□□ -0.17
Prpf38aQ4FK66 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC14.01□□□□□ -0.17
Prpf38aQ4FK66 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Gm13910-201ENSMUST00000121752 1428 ntBASIC14□□□□□ -0.17
Prpf38aQ4FK66 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Gm20633-201ENSMUST00000176742 2831 ntBASIC14□□□□□ -0.17
Prpf38aQ4FK66 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14□□□□□ -0.17
Prpf38aQ4FK66 Gm15595-201ENSMUST00000120840 961 ntBASIC14□□□□□ -0.17
Prpf38aQ4FK66 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms