Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ctdnep1Q3TP92 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ctdnep1Q3TP92 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ctdnep1Q3TP92 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ctdnep1Q3TP92 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ctdnep1Q3TP92 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ctdnep1Q3TP92 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ctdnep1Q3TP92 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Gm15276-201ENSMUST00000145953 498 ntBASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Gm38314-201ENSMUST00000195709 625 ntBASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ctdnep1Q3TP92 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Gm25890-201ENSMUST00000177643 165 ntBASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Gm22614-201ENSMUST00000178300 165 ntBASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Gm37666-201ENSMUST00000194110 866 ntBASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Gm8956-201ENSMUST00000203939 825 ntBASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Gm44651-201ENSMUST00000207343 372 ntBASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Gm22042-201ENSMUST00000082989 165 ntBASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Gm26110-201ENSMUST00000083971 165 ntBASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdnep1Q3TP92 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms