Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Gm16379-201ENSMUST00000161469 348 ntBASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Gm8762-201ENSMUST00000193486 339 ntBASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Gm18584-201ENSMUST00000203098 964 ntBASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43aQ3TL54 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Gm42937-201ENSMUST00000197360 752 ntBASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43aQ3TL54 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Gm24934-201ENSMUST00000103764 111 ntBASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms