Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Gm13611-201ENSMUST00000118269 318 ntBASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Gm17040-202ENSMUST00000170597 889 ntBASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Gm5523-201ENSMUST00000180415 997 ntBASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Gm27627-201ENSMUST00000183644 150 ntBASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Khdc4Q3TCX3 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Gm24514-201ENSMUST00000174961 285 ntBASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Khdc4Q3TCX3 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Khdc4Q3TCX3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Khdc4Q3TCX3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Khdc4Q3TCX3 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Khdc4Q3TCX3 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.46□□□□□ -0.58
Khdc4Q3TCX3 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Khdc4Q3TCX3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Khdc4Q3TCX3 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Khdc4Q3TCX3 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Khdc4Q3TCX3 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.46□□□□□ -0.58
Khdc4Q3TCX3 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Khdc4Q3TCX3 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Khdc4Q3TCX3 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms