Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Gm7940-201ENSMUST00000218195 769 ntBASIC11.54□□□□□ -0.56
Hoxc4Q08624 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.54□□□□□ -0.56
Hoxc4Q08624 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.53□□□□□ -0.56
Hoxc4Q08624 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Gm15131-201ENSMUST00000119124 595 ntBASIC11.53□□□□□ -0.56
Hoxc4Q08624 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Gm17391-201ENSMUST00000171036 126 ntBASIC11.53□□□□□ -0.56
Hoxc4Q08624 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Gm7467-201ENSMUST00000185173 652 ntBASIC11.53□□□□□ -0.56
Hoxc4Q08624 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.53□□□□□ -0.56
Hoxc4Q08624 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Gm44506-201ENSMUST00000206278 965 ntBASIC11.53□□□□□ -0.56
Hoxc4Q08624 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Hoxc4Q08624 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.53□□□□□ -0.56
Hoxc4Q08624 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.53□□□□□ -0.56
Hoxc4Q08624 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.53□□□□□ -0.56
Hoxc4Q08624 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.53□□□□□ -0.56
Hoxc4Q08624 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc4Q08624 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.53□□□□□ -0.56
Hoxc4Q08624 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Hoxc4Q08624 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxc4Q08624 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Hoxc4Q08624 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxc4Q08624 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.52□□□□□ -0.56
Hoxc4Q08624 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxc4Q08624 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.56
Hoxc4Q08624 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxc4Q08624 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.52□□□□□ -0.56
Hoxc4Q08624 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxc4Q08624 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxc4Q08624 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Hoxc4Q08624 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxc4Q08624 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxc4Q08624 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Hoxc4Q08624 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.52□□□□□ -0.57
Hoxc4Q08624 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Gm23045-201ENSMUST00000175041 96 ntBASIC11.52□□□□□ -0.57
Hoxc4Q08624 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 1354.8 ms