Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cntn3Q07409 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cntn3Q07409 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cntn3Q07409 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cntn3Q07409 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cntn3Q07409 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.62□□□□□ -0.39
Cntn3Q07409 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
Cntn3Q07409 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cntn3Q07409 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cntn3Q07409 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cntn3Q07409 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cntn3Q07409 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cntn3Q07409 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cntn3Q07409 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cntn3Q07409 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.62□□□□□ -0.39
Cntn3Q07409 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cntn3Q07409 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cntn3Q07409 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.62□□□□□ -0.39
Cntn3Q07409 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cntn3Q07409 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cntn3Q07409 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cntn3Q07409 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cntn3Q07409 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cntn3Q07409 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cntn3Q07409 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cntn3Q07409 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Cntn3Q07409 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
Cntn3Q07409 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.61□□□□□ -0.39
Cntn3Q07409 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cntn3Q07409 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cntn3Q07409 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.61□□□□□ -0.39
Cntn3Q07409 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.61□□□□□ -0.39
Cntn3Q07409 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cntn3Q07409 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.61□□□□□ -0.39
Cntn3Q07409 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.61□□□□□ -0.39
Cntn3Q07409 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cntn3Q07409 Gm7848-201ENSMUST00000210739 718 ntBASIC12.61□□□□□ -0.39
Cntn3Q07409 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cntn3Q07409 Gm270-201ENSMUST00000223010 976 ntBASIC12.61□□□□□ -0.39
Cntn3Q07409 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cntn3Q07409 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.61□□□□□ -0.39
Cntn3Q07409 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cntn3Q07409 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cntn3Q07409 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cntn3Q07409 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cntn3Q07409 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cntn3Q07409 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cntn3Q07409 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.61□□□□□ -0.39
Cntn3Q07409 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cntn3Q07409 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cntn3Q07409 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cntn3Q07409 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cntn3Q07409 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cntn3Q07409 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.6□□□□□ -0.39
Cntn3Q07409 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cntn3Q07409 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cntn3Q07409 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cntn3Q07409 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cntn3Q07409 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.6□□□□□ -0.39
Cntn3Q07409 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Cntn3Q07409 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.6□□□□□ -0.39
Cntn3Q07409 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.6□□□□□ -0.39
Cntn3Q07409 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cntn3Q07409 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
Cntn3Q07409 Mir7677-201ENSMUST00000184226 67 ntBASIC12.6□□□□□ -0.39
Cntn3Q07409 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.6□□□□□ -0.39
Cntn3Q07409 Gm43378-201ENSMUST00000199336 582 ntBASIC12.6□□□□□ -0.39
Cntn3Q07409 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cntn3Q07409 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.6□□□□□ -0.39
Cntn3Q07409 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cntn3Q07409 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cntn3Q07409 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cntn3Q07409 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cntn3Q07409 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cntn3Q07409 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cntn3Q07409 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cntn3Q07409 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cntn3Q07409 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Cntn3Q07409 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cntn3Q07409 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cntn3Q07409 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cntn3Q07409 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cntn3Q07409 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.6□□□□□ -0.39
Cntn3Q07409 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn3Q07409 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn3Q07409 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.59□□□□□ -0.39
Cntn3Q07409 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn3Q07409 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Cntn3Q07409 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn3Q07409 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn3Q07409 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cntn3Q07409 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cntn3Q07409 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn3Q07409 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.59□□□□□ -0.39
Cntn3Q07409 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn3Q07409 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn3Q07409 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.59□□□□□ -0.39
Cntn3Q07409 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.59□□□□□ -0.39
Cntn3Q07409 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn3Q07409 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms