Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn6Q03958 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.09□□□□□ -0.47
Pfdn6Q03958 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Gm15547-201ENSMUST00000122152 333 ntBASIC12.09□□□□□ -0.47
Pfdn6Q03958 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Pfdn6Q03958 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.09□□□□□ -0.47
Pfdn6Q03958 Gm9368-201ENSMUST00000219348 831 ntBASIC12.09□□□□□ -0.47
Pfdn6Q03958 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.09□□□□□ -0.47
Pfdn6Q03958 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.09□□□□□ -0.47
Pfdn6Q03958 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn6Q03958 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Pfdn6Q03958 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pfdn6Q03958 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.08□□□□□ -0.47
Pfdn6Q03958 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pfdn6Q03958 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pfdn6Q03958 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.08□□□□□ -0.48
Pfdn6Q03958 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Gm13392-201ENSMUST00000117708 150 ntBASIC12.08□□□□□ -0.48
Pfdn6Q03958 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.08□□□□□ -0.48
Pfdn6Q03958 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.08□□□□□ -0.48
Pfdn6Q03958 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Gm30285-201ENSMUST00000214614 422 ntBASIC12.08□□□□□ -0.48
Pfdn6Q03958 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.08□□□□□ -0.48
Pfdn6Q03958 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.08□□□□□ -0.48
Pfdn6Q03958 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Gm9823-201ENSMUST00000051212 327 ntBASIC12.08□□□□□ -0.48
Pfdn6Q03958 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.08□□□□□ -0.48
Pfdn6Q03958 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.08□□□□□ -0.48
Pfdn6Q03958 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.08□□□□□ -0.48
Pfdn6Q03958 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms