Protein–RNA interactions for Protein: P56399

Usp5, Ubiquitin carboxyl-terminal hydrolase 5, mousemouse

Known RBP Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp5P56399 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.01□□□□□ -0.17
Usp5P56399 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.01□□□□□ -0.17
Usp5P56399 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp5P56399 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp5P56399 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Usp5P56399 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
Usp5P56399 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.01□□□□□ -0.17
Usp5P56399 Gm8956-201ENSMUST00000203939 825 ntBASIC14.01□□□□□ -0.17
Usp5P56399 Gm26448-201ENSMUST00000082446 203 ntBASIC14.01□□□□□ -0.17
Usp5P56399 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp5P56399 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp5P56399 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp5P56399 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp5P56399 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Usp5P56399 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp5P56399 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp5P56399 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp5P56399 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp5P56399 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp5P56399 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp5P56399 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.01□□□□□ -0.17
Usp5P56399 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp5P56399 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp5P56399 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp5P56399 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp5P56399 Gm43447-201ENSMUST00000198471 1535 ntBASIC14□□□□□ -0.17
Usp5P56399 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp5P56399 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Usp5P56399 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14□□□□□ -0.17
Usp5P56399 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14□□□□□ -0.17
Usp5P56399 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp5P56399 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Usp5P56399 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp5P56399 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Usp5P56399 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp5P56399 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Usp5P56399 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14□□□□□ -0.17
Usp5P56399 Gm26286-201ENSMUST00000104166 134 ntBASIC14□□□□□ -0.17
Usp5P56399 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14□□□□□ -0.17
Usp5P56399 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14□□□□□ -0.17
Usp5P56399 Gm12566-201ENSMUST00000121479 359 ntBASIC14□□□□□ -0.17
Usp5P56399 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC14□□□□□ -0.17
Usp5P56399 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14□□□□□ -0.17
Usp5P56399 Mir6979-201ENSMUST00000183927 56 ntBASIC14□□□□□ -0.17
Usp5P56399 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Usp5P56399 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Usp5P56399 Gm4157-201ENSMUST00000211647 679 ntBASIC14□□□□□ -0.17
Usp5P56399 Abhd11os-203ENSMUST00000222613 363 ntBASIC14□□□□□ -0.17
Usp5P56399 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp5P56399 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp5P56399 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp5P56399 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp5P56399 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp5P56399 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Usp5P56399 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp5P56399 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp5P56399 Gm7224-201ENSMUST00000121359 2066 ntBASIC14□□□□□ -0.17
Usp5P56399 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14□□□□□ -0.17
Usp5P56399 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Usp5P56399 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp5P56399 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp5P56399 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp5P56399 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp5P56399 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp5P56399 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.99□□□□□ -0.17
Usp5P56399 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp5P56399 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Usp5P56399 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp5P56399 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp5P56399 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Usp5P56399 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp5P56399 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.99□□□□□ -0.17
Usp5P56399 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.99□□□□□ -0.17
Usp5P56399 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp5P56399 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.99□□□□□ -0.17
Usp5P56399 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.99□□□□□ -0.17
Usp5P56399 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Usp5P56399 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp5P56399 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp5P56399 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
Usp5P56399 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp5P56399 Gm23596-201ENSMUST00000104304 132 ntBASIC13.99□□□□□ -0.17
Usp5P56399 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Usp5P56399 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.99□□□□□ -0.17
Usp5P56399 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.99□□□□□ -0.17
Usp5P56399 Gm18734-201ENSMUST00000172937 808 ntBASIC13.99□□□□□ -0.17
Usp5P56399 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp5P56399 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp5P56399 Gm18893-201ENSMUST00000198416 943 ntBASIC13.99□□□□□ -0.17
Usp5P56399 Gm807-202ENSMUST00000224929 408 ntBASIC13.99□□□□□ -0.17
Usp5P56399 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.99□□□□□ -0.17
Usp5P56399 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.99□□□□□ -0.17
Usp5P56399 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp5P56399 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Usp5P56399 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp5P56399 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Usp5P56399 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp5P56399 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Usp5P56399 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp5P56399 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms