Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.98□□□□□ -0.33
Nub1P54729 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Gm11989-201ENSMUST00000117240 672 ntBASIC12.98□□□□□ -0.33
Nub1P54729 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Gm11362-201ENSMUST00000118838 850 ntBASIC12.98□□□□□ -0.33
Nub1P54729 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.98□□□□□ -0.33
Nub1P54729 Gm7722-201ENSMUST00000120646 741 ntBASIC12.98□□□□□ -0.33
Nub1P54729 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Nub1P54729 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.98□□□□□ -0.33
Nub1P54729 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Nub1P54729 Rprl1-202ENSMUST00000198476 238 ntBASIC12.98□□□□□ -0.33
Nub1P54729 Gm45598-202ENSMUST00000210719 986 ntBASIC12.98□□□□□ -0.33
Nub1P54729 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Nub1P54729 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Nub1P54729 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nub1P54729 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.97□□□□□ -0.33
Nub1P54729 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Nub1P54729 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.97□□□□□ -0.33
Nub1P54729 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Nub1P54729 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.97□□□□□ -0.33
Nub1P54729 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.97□□□□□ -0.33
Nub1P54729 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.97□□□□□ -0.33
Nub1P54729 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nub1P54729 Gm12164-201ENSMUST00000121695 551 ntBASIC12.97□□□□□ -0.33
Nub1P54729 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.97□□□□□ -0.33
Nub1P54729 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Nub1P54729 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Nub1P54729 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.97□□□□□ -0.33
Nub1P54729 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nub1P54729 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.97□□□□□ -0.33
Nub1P54729 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.97□□□□□ -0.33
Nub1P54729 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nub1P54729 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Nub1P54729 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.96□□□□□ -0.33
Nub1P54729 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nub1P54729 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.96□□□□□ -0.33
Nub1P54729 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nub1P54729 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nub1P54729 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nub1P54729 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.96□□□□□ -0.33
Nub1P54729 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nub1P54729 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nub1P54729 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nub1P54729 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Nub1P54729 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nub1P54729 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nub1P54729 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nub1P54729 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.96□□□□□ -0.33
Nub1P54729 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Nub1P54729 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.96□□□□□ -0.33
Nub1P54729 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nub1P54729 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nub1P54729 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms