Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sox1P53783 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.28□□□□□ -0.44
Sox1P53783 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Sox1P53783 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sox1P53783 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.28□□□□□ -0.44
Sox1P53783 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.28□□□□□ -0.44
Sox1P53783 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.28□□□□□ -0.44
Sox1P53783 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Gm12986-201ENSMUST00000119037 967 ntBASIC12.28□□□□□ -0.44
Sox1P53783 Gm15982-201ENSMUST00000121681 554 ntBASIC12.28□□□□□ -0.44
Sox1P53783 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.28□□□□□ -0.44
Sox1P53783 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.28□□□□□ -0.44
Sox1P53783 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.28□□□□□ -0.44
Sox1P53783 Gm33707-201ENSMUST00000195135 569 ntBASIC12.28□□□□□ -0.44
Sox1P53783 Gm39288-201ENSMUST00000210554 446 ntBASIC12.28□□□□□ -0.44
Sox1P53783 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sox1P53783 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC12.28□□□□□ -0.44
Sox1P53783 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.28□□□□□ -0.44
Sox1P53783 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Sox1P53783 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.28□□□□□ -0.44
Sox1P53783 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox1P53783 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.27□□□□□ -0.44
Sox1P53783 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox1P53783 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sox1P53783 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox1P53783 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sox1P53783 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sox1P53783 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox1P53783 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sox1P53783 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.27□□□□□ -0.44
Sox1P53783 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.27□□□□□ -0.44
Sox1P53783 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Sox1P53783 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Sox1P53783 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.27□□□□□ -0.45
Sox1P53783 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.27□□□□□ -0.45
Sox1P53783 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox1P53783 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox1P53783 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox1P53783 Gm12791-201ENSMUST00000120788 655 ntBASIC12.27□□□□□ -0.45
Sox1P53783 Gm37319-201ENSMUST00000193500 636 ntBASIC12.27□□□□□ -0.45
Sox1P53783 Gm37826-201ENSMUST00000195329 322 ntBASIC12.27□□□□□ -0.45
Sox1P53783 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox1P53783 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox1P53783 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC12.27□□□□□ -0.45
Sox1P53783 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.27□□□□□ -0.45
Sox1P53783 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.27□□□□□ -0.45
Sox1P53783 Gm7192-201ENSMUST00000210793 1137 ntBASIC12.27□□□□□ -0.45
Sox1P53783 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.27□□□□□ -0.45
Sox1P53783 Gm23105-201ENSMUST00000083719 134 ntBASIC12.27□□□□□ -0.45
Sox1P53783 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sox1P53783 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.27□□□□□ -0.45
Sox1P53783 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox1P53783 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox1P53783 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox1P53783 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox1P53783 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox1P53783 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox1P53783 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox1P53783 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox1P53783 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox1P53783 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sox1P53783 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sox1P53783 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.26□□□□□ -0.45
Sox1P53783 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms