Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC9.94□□□□□ -0.82
Nkx2-1P50220 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC9.94□□□□□ -0.82
Nkx2-1P50220 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Gm13127-201ENSMUST00000118978 1389 ntBASIC9.94□□□□□ -0.82
Nkx2-1P50220 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Gm11478-201ENSMUST00000117851 599 ntBASIC9.94□□□□□ -0.82
Nkx2-1P50220 Gm9083-201ENSMUST00000120423 819 ntBASIC9.94□□□□□ -0.82
Nkx2-1P50220 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Nkx2-1P50220 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Gm24196-201ENSMUST00000179161 110 ntBASIC9.94□□□□□ -0.82
Nkx2-1P50220 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC9.94□□□□□ -0.82
Nkx2-1P50220 Gm38092-201ENSMUST00000195600 653 ntBASIC9.94□□□□□ -0.82
Nkx2-1P50220 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC9.94□□□□□ -0.82
Nkx2-1P50220 Gm8598-201ENSMUST00000221184 836 ntBASIC9.94□□□□□ -0.82
Nkx2-1P50220 Gm2824-203ENSMUST00000226189 1228 ntBASIC9.94□□□□□ -0.82
Nkx2-1P50220 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.94□□□□□ -0.82
Nkx2-1P50220 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.94□□□□□ -0.82
Nkx2-1P50220 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Nkx2-1P50220 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Nkx2-1P50220 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.94□□□□□ -0.82
Nkx2-1P50220 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-1P50220 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-1P50220 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.93□□□□□ -0.82
Nkx2-1P50220 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.93□□□□□ -0.82
Nkx2-1P50220 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-1P50220 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-1P50220 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Gm13492-201ENSMUST00000119772 665 ntBASIC9.93□□□□□ -0.82
Nkx2-1P50220 Gm11964-201ENSMUST00000120982 444 ntBASIC9.93□□□□□ -0.82
Nkx2-1P50220 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Gm23119-201ENSMUST00000158610 140 ntBASIC9.93□□□□□ -0.82
Nkx2-1P50220 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC9.93□□□□□ -0.82
Nkx2-1P50220 Gm4768-201ENSMUST00000206199 686 ntBASIC9.93□□□□□ -0.82
Nkx2-1P50220 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC9.93□□□□□ -0.82
Nkx2-1P50220 AC167013.1-201ENSMUST00000228592 202 ntBASIC9.93□□□□□ -0.82
Nkx2-1P50220 Gm10012-201ENSMUST00000078252 192 ntBASIC9.93□□□□□ -0.82
Nkx2-1P50220 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms