Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox18P43680 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.74□□□□□ -0.53
Sox18P43680 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.74□□□□□ -0.53
Sox18P43680 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox18P43680 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox18P43680 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox18P43680 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox18P43680 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.74□□□□□ -0.53
Sox18P43680 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sox18P43680 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Mir466f-2-201ENSMUST00000104805 94 ntBASIC11.73□□□□□ -0.53
Sox18P43680 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.73□□□□□ -0.53
Sox18P43680 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Sox18P43680 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Sox18P43680 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.73□□□□□ -0.53
Sox18P43680 Gm14724-201ENSMUST00000118400 537 ntBASIC11.73□□□□□ -0.53
Sox18P43680 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Gm1848-201ENSMUST00000120711 789 ntBASIC11.73□□□□□ -0.53
Sox18P43680 Gm8199-201ENSMUST00000121323 823 ntBASIC11.73□□□□□ -0.53
Sox18P43680 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.73□□□□□ -0.53
Sox18P43680 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Gm9499-201ENSMUST00000180888 964 ntBASIC11.73□□□□□ -0.53
Sox18P43680 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC11.73□□□□□ -0.53
Sox18P43680 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.73□□□□□ -0.53
Sox18P43680 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.73□□□□□ -0.53
Sox18P43680 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Gm42937-201ENSMUST00000197360 752 ntBASIC11.73□□□□□ -0.53
Sox18P43680 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Gm2965-201ENSMUST00000198365 343 ntBASIC11.73□□□□□ -0.53
Sox18P43680 Gm43778-201ENSMUST00000199438 199 ntBASIC11.73□□□□□ -0.53
Sox18P43680 Gm19253-201ENSMUST00000204279 307 ntBASIC11.73□□□□□ -0.53
Sox18P43680 Gm45120-201ENSMUST00000208880 408 ntBASIC11.73□□□□□ -0.53
Sox18P43680 Gm19640-201ENSMUST00000214849 464 ntBASIC11.73□□□□□ -0.53
Sox18P43680 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Gm9111-201ENSMUST00000219394 709 ntBASIC11.73□□□□□ -0.53
Sox18P43680 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.73□□□□□ -0.53
Sox18P43680 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.73□□□□□ -0.53
Sox18P43680 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.73□□□□□ -0.53
Sox18P43680 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.73□□□□□ -0.53
Sox18P43680 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Gm25201-201ENSMUST00000083093 170 ntBASIC11.73□□□□□ -0.53
Sox18P43680 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.73□□□□□ -0.53
Sox18P43680 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Sox18P43680 Mir483-201ENSMUST00000093631 73 ntBASIC11.73□□□□□ -0.53
Sox18P43680 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sox18P43680 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.73□□□□□ -0.53
Sox18P43680 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Sox18P43680 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox18P43680 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sox18P43680 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Sox18P43680 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.72□□□□□ -0.53
Sox18P43680 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Sox18P43680 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sox18P43680 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.72□□□□□ -0.53
Sox18P43680 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.72□□□□□ -0.53
Sox18P43680 Gm11470-201ENSMUST00000118868 1475 ntBASIC11.72□□□□□ -0.53
Sox18P43680 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.72□□□□□ -0.53
Sox18P43680 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sox18P43680 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Gm12948-201ENSMUST00000119406 682 ntBASIC11.72□□□□□ -0.53
Sox18P43680 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Gm25295-201ENSMUST00000122794 306 ntBASIC11.72□□□□□ -0.53
Sox18P43680 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Mir1956-201ENSMUST00000157748 65 ntBASIC11.72□□□□□ -0.53
Sox18P43680 Gm3760-201ENSMUST00000167475 804 ntBASIC11.72□□□□□ -0.53
Sox18P43680 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms