Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Nkx2-2P42586 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11□□□□□ -0.65
Nkx2-2P42586 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11□□□□□ -0.65
Nkx2-2P42586 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Nkx2-2P42586 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11□□□□□ -0.65
Nkx2-2P42586 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Nkx2-2P42586 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Gm15004-201ENSMUST00000119192 630 ntBASIC11□□□□□ -0.65
Nkx2-2P42586 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Gm26083-201ENSMUST00000157904 193 ntBASIC11□□□□□ -0.65
Nkx2-2P42586 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11□□□□□ -0.65
Nkx2-2P42586 AY036118-201ENSMUST00000200021 923 ntBASIC11□□□□□ -0.65
Nkx2-2P42586 AC154171.1-201ENSMUST00000224610 643 ntBASIC11□□□□□ -0.65
Nkx2-2P42586 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11□□□□□ -0.65
Nkx2-2P42586 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Nkx2-2P42586 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11□□□□□ -0.65
Nkx2-2P42586 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Nkx2-2P42586 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Nkx2-2P42586 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-2P42586 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.99□□□□□ -0.65
Nkx2-2P42586 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.99□□□□□ -0.65
Nkx2-2P42586 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Gm14130-201ENSMUST00000118417 987 ntBASIC10.99□□□□□ -0.65
Nkx2-2P42586 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.99□□□□□ -0.65
Nkx2-2P42586 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.99□□□□□ -0.65
Nkx2-2P42586 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.99□□□□□ -0.65
Nkx2-2P42586 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.99□□□□□ -0.65
Nkx2-2P42586 Gm43438-201ENSMUST00000198133 379 ntBASIC10.99□□□□□ -0.65
Nkx2-2P42586 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.99□□□□□ -0.65
Nkx2-2P42586 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.99□□□□□ -0.65
Nkx2-2P42586 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Nkx2-2P42586 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.99□□□□□ -0.65
Nkx2-2P42586 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.99□□□□□ -0.65
Nkx2-2P42586 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-2P42586 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.98□□□□□ -0.65
Nkx2-2P42586 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms