Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Chd1P40201 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd1P40201 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd1P40201 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
Chd1P40201 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chd1P40201 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd1P40201 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Chd1P40201 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd1P40201 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd1P40201 Gm6441-201ENSMUST00000120983 696 ntBASIC17.61■□□□□ 0.41
Chd1P40201 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC17.61■□□□□ 0.41
Chd1P40201 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chd1P40201 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC17.61■□□□□ 0.41
Chd1P40201 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd1P40201 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd1P40201 AC159195.1-201ENSMUST00000225867 2086 ntBASIC17.61■□□□□ 0.41
Chd1P40201 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd1P40201 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd1P40201 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Chd1P40201 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd1P40201 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd1P40201 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd1P40201 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd1P40201 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.61■□□□□ 0.41
Chd1P40201 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Chd1P40201 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd1P40201 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd1P40201 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chd1P40201 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Chd1P40201 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Chd1P40201 Olfml3-204ENSMUST00000169286 874 ntBASIC17.61■□□□□ 0.41
Chd1P40201 Mir6934-201ENSMUST00000183965 62 ntBASIC17.61■□□□□ 0.41
Chd1P40201 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chd1P40201 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chd1P40201 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
Chd1P40201 Gm7589-201ENSMUST00000085631 534 ntBASIC17.61■□□□□ 0.41
Chd1P40201 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd1P40201 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Chd1P40201 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd1P40201 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd1P40201 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd1P40201 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chd1P40201 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chd1P40201 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chd1P40201 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd1P40201 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd1P40201 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chd1P40201 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
Chd1P40201 Gm16228-201ENSMUST00000162286 809 ntBASIC17.6■□□□□ 0.41
Chd1P40201 Gm5342-201ENSMUST00000181982 1003 ntBASIC17.6■□□□□ 0.41
Chd1P40201 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Chd1P40201 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd1P40201 Gm8873-201ENSMUST00000217847 1439 ntBASIC17.6■□□□□ 0.41
Chd1P40201 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Chd1P40201 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd1P40201 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd1P40201 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Chd1P40201 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd1P40201 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd1P40201 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.59■□□□□ 0.41
Chd1P40201 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd1P40201 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chd1P40201 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Chd1P40201 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Chd1P40201 Gm14398-201ENSMUST00000117287 1073 ntBASIC17.59■□□□□ 0.41
Chd1P40201 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Chd1P40201 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd1P40201 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd1P40201 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chd1P40201 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC17.59■□□□□ 0.41
Chd1P40201 Gm18014-201ENSMUST00000183369 817 ntBASIC17.59■□□□□ 0.41
Chd1P40201 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Chd1P40201 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Chd1P40201 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd1P40201 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chd1P40201 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd1P40201 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd1P40201 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd1P40201 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Chd1P40201 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC17.59■□□□□ 0.41
Chd1P40201 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd1P40201 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd1P40201 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd1P40201 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC17.59■□□□□ 0.41
Chd1P40201 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd1P40201 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Chd1P40201 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd1P40201 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC17.59■□□□□ 0.41
Chd1P40201 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd1P40201 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd1P40201 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd1P40201 Ighv13-1-201ENSMUST00000103480 294 ntBASIC17.58■□□□□ 0.41
Chd1P40201 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC17.58■□□□□ 0.41
Chd1P40201 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Chd1P40201 Gm43117-201ENSMUST00000198531 379 ntBASIC17.58■□□□□ 0.41
Chd1P40201 Gm43460-201ENSMUST00000202491 1057 ntBASIC17.58■□□□□ 0.41
Chd1P40201 Gm6352-201ENSMUST00000203583 1134 ntBASIC17.58■□□□□ 0.41
Chd1P40201 CT010505.2-201ENSMUST00000227918 998 ntBASIC17.58■□□□□ 0.41
Chd1P40201 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chd1P40201 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms