Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cdh4P39038 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.53□□□□□ -0.56
Cdh4P39038 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.53□□□□□ -0.56
Cdh4P39038 Gm7722-201ENSMUST00000120646 741 ntBASIC11.53□□□□□ -0.56
Cdh4P39038 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.53□□□□□ -0.56
Cdh4P39038 Gm14017-201ENSMUST00000121934 386 ntBASIC11.53□□□□□ -0.56
Cdh4P39038 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.53□□□□□ -0.56
Cdh4P39038 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cdh4P39038 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Cdh4P39038 Gm2383-201ENSMUST00000181461 807 ntBASIC11.53□□□□□ -0.56
Cdh4P39038 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.53□□□□□ -0.56
Cdh4P39038 Gm8913-201ENSMUST00000209491 641 ntBASIC11.53□□□□□ -0.56
Cdh4P39038 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.53□□□□□ -0.56
Cdh4P39038 Gm18212-201ENSMUST00000211678 889 ntBASIC11.53□□□□□ -0.56
Cdh4P39038 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Mir433-201ENSMUST00000093564 124 ntBASIC11.53□□□□□ -0.56
Cdh4P39038 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cdh4P39038 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.53□□□□□ -0.56
Cdh4P39038 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh4P39038 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh4P39038 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.52□□□□□ -0.56
Cdh4P39038 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh4P39038 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh4P39038 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh4P39038 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh4P39038 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh4P39038 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Cdh4P39038 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh4P39038 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh4P39038 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Cdh4P39038 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh4P39038 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh4P39038 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Cdh4P39038 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Cdh4P39038 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.52□□□□□ -0.57
Cdh4P39038 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.52□□□□□ -0.57
Cdh4P39038 Gm15236-201ENSMUST00000117309 379 ntBASIC11.52□□□□□ -0.57
Cdh4P39038 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Cdh4P39038 Gm14247-201ENSMUST00000120950 237 ntBASIC11.52□□□□□ -0.57
Cdh4P39038 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.52□□□□□ -0.57
Cdh4P39038 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.52□□□□□ -0.57
Cdh4P39038 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.52□□□□□ -0.57
Cdh4P39038 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.52□□□□□ -0.57
Cdh4P39038 Gm18056-201ENSMUST00000207670 568 ntBASIC11.52□□□□□ -0.57
Cdh4P39038 Gm18061-201ENSMUST00000208350 562 ntBASIC11.52□□□□□ -0.57
Cdh4P39038 Gm18063-201ENSMUST00000208529 568 ntBASIC11.52□□□□□ -0.57
Cdh4P39038 Gm18052-201ENSMUST00000208750 559 ntBASIC11.52□□□□□ -0.57
Cdh4P39038 Gm45433-201ENSMUST00000209386 247 ntBASIC11.52□□□□□ -0.57
Cdh4P39038 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.52□□□□□ -0.57
Cdh4P39038 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.52□□□□□ -0.57
Cdh4P39038 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.52□□□□□ -0.57
Cdh4P39038 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Cdh4P39038 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.57
Cdh4P39038 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms