Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Upk2P38575 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Upk2P38575 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Upk2P38575 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk2P38575 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk2P38575 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk2P38575 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk2P38575 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk2P38575 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk2P38575 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Upk2P38575 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk2P38575 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk2P38575 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk2P38575 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.53□□□□□ -0.72
Upk2P38575 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Upk2P38575 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk2P38575 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.53□□□□□ -0.72
Upk2P38575 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Upk2P38575 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Upk2P38575 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Upk2P38575 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Upk2P38575 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk2P38575 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Upk2P38575 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.52□□□□□ -0.72
Upk2P38575 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Upk2P38575 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Upk2P38575 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Upk2P38575 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Upk2P38575 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Upk2P38575 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Upk2P38575 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Upk2P38575 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Upk2P38575 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.52□□□□□ -0.73
Upk2P38575 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.52□□□□□ -0.73
Upk2P38575 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.52□□□□□ -0.73
Upk2P38575 Gm43822-201ENSMUST00000200285 476 ntBASIC10.52□□□□□ -0.73
Upk2P38575 Gm4607-201ENSMUST00000206649 577 ntBASIC10.52□□□□□ -0.73
Upk2P38575 Gm44651-201ENSMUST00000207343 372 ntBASIC10.52□□□□□ -0.73
Upk2P38575 AC125350.2-201ENSMUST00000224737 727 ntBASIC10.52□□□□□ -0.73
Upk2P38575 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.52□□□□□ -0.73
Upk2P38575 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Upk2P38575 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.52□□□□□ -0.73
Upk2P38575 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Upk2P38575 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.52□□□□□ -0.73
Upk2P38575 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Upk2P38575 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Upk2P38575 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk2P38575 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Upk2P38575 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk2P38575 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk2P38575 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk2P38575 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk2P38575 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Upk2P38575 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.51□□□□□ -0.73
Upk2P38575 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.51□□□□□ -0.73
Upk2P38575 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Upk2P38575 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk2P38575 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk2P38575 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk2P38575 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Upk2P38575 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Upk2P38575 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk2P38575 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk2P38575 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk2P38575 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk2P38575 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk2P38575 Gm15198-201ENSMUST00000117283 177 ntBASIC10.51□□□□□ -0.73
Upk2P38575 Gm14723-201ENSMUST00000118686 215 ntBASIC10.51□□□□□ -0.73
Upk2P38575 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.51□□□□□ -0.73
Upk2P38575 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Upk2P38575 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Upk2P38575 Gm20482-202ENSMUST00000174729 825 ntBASIC10.51□□□□□ -0.73
Upk2P38575 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Upk2P38575 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.51□□□□□ -0.73
Upk2P38575 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.51□□□□□ -0.73
Upk2P38575 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Upk2P38575 Gm13097-201ENSMUST00000210722 397 ntBASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms