Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp3P28862 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp3P28862 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp3P28862 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.83□□□□□ -0.36
Mmp3P28862 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp3P28862 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.83□□□□□ -0.36
Mmp3P28862 Gm22920-201ENSMUST00000102175 109 ntBASIC12.83□□□□□ -0.36
Mmp3P28862 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Mmp3P28862 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.83□□□□□ -0.36
Mmp3P28862 Gm13888-201ENSMUST00000119148 422 ntBASIC12.83□□□□□ -0.36
Mmp3P28862 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.83□□□□□ -0.36
Mmp3P28862 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Mmp3P28862 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.83□□□□□ -0.36
Mmp3P28862 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp3P28862 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Mmp3P28862 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.83□□□□□ -0.36
Mmp3P28862 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.83□□□□□ -0.36
Mmp3P28862 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp3P28862 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp3P28862 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.83□□□□□ -0.36
Mmp3P28862 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.83□□□□□ -0.36
Mmp3P28862 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.83□□□□□ -0.36
Mmp3P28862 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp3P28862 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Mmp3P28862 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.83□□□□□ -0.36
Mmp3P28862 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Mmp3P28862 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp3P28862 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp3P28862 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.83□□□□□ -0.36
Mmp3P28862 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp3P28862 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Mmp3P28862 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp3P28862 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp3P28862 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp3P28862 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.83□□□□□ -0.36
Mmp3P28862 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.83□□□□□ -0.36
Mmp3P28862 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp3P28862 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp3P28862 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.82□□□□□ -0.36
Mmp3P28862 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.82□□□□□ -0.36
Mmp3P28862 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.82□□□□□ -0.36
Mmp3P28862 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Mmp3P28862 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.82□□□□□ -0.36
Mmp3P28862 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Mmp3P28862 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Gm14193-201ENSMUST00000105067 153 ntBASIC12.82□□□□□ -0.36
Mmp3P28862 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.82□□□□□ -0.36
Mmp3P28862 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.82□□□□□ -0.36
Mmp3P28862 Gm15352-201ENSMUST00000118696 270 ntBASIC12.82□□□□□ -0.36
Mmp3P28862 Gm14460-201ENSMUST00000121511 639 ntBASIC12.82□□□□□ -0.36
Mmp3P28862 Gm12208-201ENSMUST00000122004 163 ntBASIC12.82□□□□□ -0.36
Mmp3P28862 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.82□□□□□ -0.36
Mmp3P28862 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.82□□□□□ -0.36
Mmp3P28862 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.82□□□□□ -0.36
Mmp3P28862 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.82□□□□□ -0.36
Mmp3P28862 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.82□□□□□ -0.36
Mmp3P28862 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.82□□□□□ -0.36
Mmp3P28862 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.82□□□□□ -0.36
Mmp3P28862 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Mmp3P28862 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.82□□□□□ -0.36
Mmp3P28862 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Mmp3P28862 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Mmp3P28862 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp3P28862 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Mmp3P28862 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp3P28862 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp3P28862 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp3P28862 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Mmp3P28862 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp3P28862 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Mmp3P28862 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Mmp3P28862 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp3P28862 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp3P28862 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp3P28862 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp3P28862 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms