Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Col8a2P25318 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Col8a2P25318 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.02□□□□□ -0.8
Col8a2P25318 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Col8a2P25318 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Col8a2P25318 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Col8a2P25318 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Col8a2P25318 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Col8a2P25318 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Col8a2P25318 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.02□□□□□ -0.8
Col8a2P25318 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Col8a2P25318 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Col8a2P25318 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Col8a2P25318 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Col8a2P25318 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Col8a2P25318 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a2P25318 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a2P25318 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.02□□□□□ -0.81
Col8a2P25318 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a2P25318 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a2P25318 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.02□□□□□ -0.81
Col8a2P25318 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a2P25318 Gm14058-201ENSMUST00000116082 735 ntBASIC10.02□□□□□ -0.81
Col8a2P25318 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Col8a2P25318 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC10.02□□□□□ -0.81
Col8a2P25318 Gm6506-201ENSMUST00000119775 1136 ntBASIC10.02□□□□□ -0.81
Col8a2P25318 Gm11450-201ENSMUST00000121144 333 ntBASIC10.02□□□□□ -0.81
Col8a2P25318 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.02□□□□□ -0.81
Col8a2P25318 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a2P25318 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a2P25318 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a2P25318 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Col8a2P25318 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a2P25318 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC10.02□□□□□ -0.81
Col8a2P25318 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a2P25318 Gm45118-201ENSMUST00000208928 825 ntBASIC10.02□□□□□ -0.81
Col8a2P25318 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.02□□□□□ -0.81
Col8a2P25318 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Col8a2P25318 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a2P25318 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a2P25318 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a2P25318 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.02□□□□□ -0.81
Col8a2P25318 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a2P25318 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a2P25318 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a2P25318 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a2P25318 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a2P25318 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a2P25318 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.02□□□□□ -0.81
Col8a2P25318 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a2P25318 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a2P25318 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Col8a2P25318 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Col8a2P25318 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.01□□□□□ -0.81
Col8a2P25318 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.01□□□□□ -0.81
Col8a2P25318 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.01□□□□□ -0.81
Col8a2P25318 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Col8a2P25318 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Col8a2P25318 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Gm26286-201ENSMUST00000104166 134 ntBASIC10.01□□□□□ -0.81
Col8a2P25318 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Col8a2P25318 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Col8a2P25318 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.01□□□□□ -0.81
Col8a2P25318 Gm12266-201ENSMUST00000120311 962 ntBASIC10.01□□□□□ -0.81
Col8a2P25318 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.01□□□□□ -0.81
Col8a2P25318 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.01□□□□□ -0.81
Col8a2P25318 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.01□□□□□ -0.81
Col8a2P25318 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Col8a2P25318 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Gm18734-201ENSMUST00000172937 808 ntBASIC10.01□□□□□ -0.81
Col8a2P25318 Gm19353-201ENSMUST00000184561 445 ntBASIC10.01□□□□□ -0.81
Col8a2P25318 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC10.01□□□□□ -0.81
Col8a2P25318 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.01□□□□□ -0.81
Col8a2P25318 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.01□□□□□ -0.81
Col8a2P25318 Gm270-201ENSMUST00000223010 976 ntBASIC10.01□□□□□ -0.81
Col8a2P25318 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.01□□□□□ -0.81
Col8a2P25318 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Gm26448-201ENSMUST00000082446 203 ntBASIC10.01□□□□□ -0.81
Col8a2P25318 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Col8a2P25318 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.01□□□□□ -0.81
Col8a2P25318 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms