Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pde6bP23440 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6bP23440 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6bP23440 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6bP23440 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.17□□□□□ -0.3
Pde6bP23440 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.17□□□□□ -0.3
Pde6bP23440 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.17□□□□□ -0.3
Pde6bP23440 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pde6bP23440 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6bP23440 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6bP23440 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pde6bP23440 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.17□□□□□ -0.3
Pde6bP23440 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.17□□□□□ -0.3
Pde6bP23440 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6bP23440 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6bP23440 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pde6bP23440 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.17□□□□□ -0.3
Pde6bP23440 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6bP23440 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.17□□□□□ -0.3
Pde6bP23440 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6bP23440 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.17□□□□□ -0.3
Pde6bP23440 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Pde6bP23440 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6bP23440 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Pde6bP23440 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.17□□□□□ -0.3
Pde6bP23440 Gm807-202ENSMUST00000224929 408 ntBASIC13.17□□□□□ -0.3
Pde6bP23440 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6bP23440 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6bP23440 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6bP23440 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6bP23440 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.17□□□□□ -0.3
Pde6bP23440 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.17□□□□□ -0.3
Pde6bP23440 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pde6bP23440 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.17□□□□□ -0.3
Pde6bP23440 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6bP23440 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.17□□□□□ -0.3
Pde6bP23440 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.17□□□□□ -0.3
Pde6bP23440 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6bP23440 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.17□□□□□ -0.3
Pde6bP23440 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pde6bP23440 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6bP23440 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6bP23440 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6bP23440 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6bP23440 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6bP23440 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pde6bP23440 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6bP23440 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.16□□□□□ -0.3
Pde6bP23440 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Pde6bP23440 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.16□□□□□ -0.3
Pde6bP23440 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.16□□□□□ -0.3
Pde6bP23440 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pde6bP23440 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pde6bP23440 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.16□□□□□ -0.3
Pde6bP23440 Gm23251-201ENSMUST00000103773 110 ntBASIC13.16□□□□□ -0.3
Pde6bP23440 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.16□□□□□ -0.3
Pde6bP23440 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pde6bP23440 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.16□□□□□ -0.3
Pde6bP23440 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.16□□□□□ -0.3
Pde6bP23440 Gm19459-201ENSMUST00000176240 835 ntBASIC13.16□□□□□ -0.3
Pde6bP23440 Gm4482-201ENSMUST00000200876 742 ntBASIC13.16□□□□□ -0.3
Pde6bP23440 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.16□□□□□ -0.3
Pde6bP23440 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.16□□□□□ -0.3
Pde6bP23440 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.16□□□□□ -0.3
Pde6bP23440 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pde6bP23440 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC13.16□□□□□ -0.3
Pde6bP23440 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pde6bP23440 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.16□□□□□ -0.3
Pde6bP23440 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pde6bP23440 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6bP23440 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6bP23440 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pde6bP23440 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms