Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
RaraP11416 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RaraP11416 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.99□□□□□ -0.33
RaraP11416 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.98□□□□□ -0.33
RaraP11416 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.98□□□□□ -0.33
RaraP11416 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RaraP11416 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.98□□□□□ -0.33
RaraP11416 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.98□□□□□ -0.33
RaraP11416 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RaraP11416 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
RaraP11416 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RaraP11416 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.98□□□□□ -0.33
RaraP11416 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RaraP11416 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RaraP11416 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RaraP11416 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.97□□□□□ -0.33
RaraP11416 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RaraP11416 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RaraP11416 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.97□□□□□ -0.33
RaraP11416 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RaraP11416 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RaraP11416 Gm7722-201ENSMUST00000120646 741 ntBASIC12.97□□□□□ -0.33
RaraP11416 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RaraP11416 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RaraP11416 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.97□□□□□ -0.33
RaraP11416 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RaraP11416 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RaraP11416 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.97□□□□□ -0.33
RaraP11416 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
RaraP11416 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.97□□□□□ -0.33
RaraP11416 Gm43433-201ENSMUST00000196573 481 ntBASIC12.97□□□□□ -0.33
RaraP11416 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.97□□□□□ -0.33
RaraP11416 Gm45880-201ENSMUST00000213041 853 ntBASIC12.97□□□□□ -0.33
RaraP11416 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.97□□□□□ -0.33
RaraP11416 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.97□□□□□ -0.33
RaraP11416 Morn2-202ENSMUST00000227729 656 ntBASIC12.97□□□□□ -0.33
RaraP11416 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
RaraP11416 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RaraP11416 Gm9823-201ENSMUST00000051212 327 ntBASIC12.97□□□□□ -0.33
RaraP11416 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RaraP11416 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RaraP11416 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RaraP11416 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.97□□□□□ -0.33
RaraP11416 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RaraP11416 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.97□□□□□ -0.33
RaraP11416 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RaraP11416 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RaraP11416 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.97□□□□□ -0.33
RaraP11416 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RaraP11416 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RaraP11416 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RaraP11416 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RaraP11416 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RaraP11416 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RaraP11416 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RaraP11416 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RaraP11416 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.96□□□□□ -0.33
RaraP11416 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RaraP11416 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.96□□□□□ -0.33
RaraP11416 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.96□□□□□ -0.33
RaraP11416 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.96□□□□□ -0.33
RaraP11416 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RaraP11416 Gm11793-201ENSMUST00000120433 981 ntBASIC12.96□□□□□ -0.33
RaraP11416 Gm15610-201ENSMUST00000120584 195 ntBASIC12.96□□□□□ -0.33
RaraP11416 Gm13786-201ENSMUST00000122371 333 ntBASIC12.96□□□□□ -0.33
RaraP11416 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RaraP11416 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.96□□□□□ -0.33
RaraP11416 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.96□□□□□ -0.33
RaraP11416 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.96□□□□□ -0.33
RaraP11416 Gm37424-201ENSMUST00000191727 561 ntBASIC12.96□□□□□ -0.33
RaraP11416 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.96□□□□□ -0.33
RaraP11416 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RaraP11416 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RaraP11416 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RaraP11416 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RaraP11416 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms