Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 AC136376.2-201ENSMUST00000228819 490 ntBASIC15.48■□□□□ 0.07
Hoxc9P09633 Gm23680-201ENSMUST00000083162 164 ntBASIC15.48■□□□□ 0.07
Hoxc9P09633 Gm23105-201ENSMUST00000083719 134 ntBASIC15.48■□□□□ 0.07
Hoxc9P09633 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC15.48■□□□□ 0.07
Hoxc9P09633 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Gm21358-201ENSMUST00000191645 1659 ntBASIC15.48■□□□□ 0.07
Hoxc9P09633 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Hoxc9P09633 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hoxc9P09633 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Hoxc9P09633 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC15.47■□□□□ 0.07
Hoxc9P09633 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hoxc9P09633 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Hoxc9P09633 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hoxc9P09633 Gm25766-201ENSMUST00000104101 131 ntBASIC15.47■□□□□ 0.07
Hoxc9P09633 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Hoxc9P09633 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Hoxc9P09633 Gm15615-201ENSMUST00000118876 198 ntBASIC15.47■□□□□ 0.07
Hoxc9P09633 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Hoxc9P09633 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Hoxc9P09633 Gm6407-201ENSMUST00000176468 549 ntBASIC15.47■□□□□ 0.07
Hoxc9P09633 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Hoxc9P09633 Gm29410-201ENSMUST00000188383 694 ntBASIC15.47■□□□□ 0.07
Hoxc9P09633 Gm7504-201ENSMUST00000201449 424 ntBASIC15.47■□□□□ 0.07
Hoxc9P09633 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC15.47■□□□□ 0.07
Hoxc9P09633 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hoxc9P09633 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC15.47■□□□□ 0.07
Hoxc9P09633 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC15.47■□□□□ 0.07
Hoxc9P09633 CT009546.1-201ENSMUST00000222573 1120 ntBASIC15.47■□□□□ 0.07
Hoxc9P09633 AC118639.2-201ENSMUST00000226289 223 ntBASIC15.47■□□□□ 0.07
Hoxc9P09633 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hoxc9P09633 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Hoxc9P09633 Gm1840-201ENSMUST00000051687 1432 ntBASIC15.47■□□□□ 0.07
Hoxc9P09633 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Hoxc9P09633 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hoxc9P09633 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Hoxc9P09633 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hoxc9P09633 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.47■□□□□ 0.07
Hoxc9P09633 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Hoxc9P09633 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hoxc9P09633 Gm13347-201ENSMUST00000120298 1353 ntBASIC15.47■□□□□ 0.07
Hoxc9P09633 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hoxc9P09633 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Hoxc9P09633 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hoxc9P09633 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hoxc9P09633 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hoxc9P09633 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hoxc9P09633 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hoxc9P09633 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC15.46■□□□□ 0.07
Hoxc9P09633 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC15.46■□□□□ 0.07
Hoxc9P09633 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Hoxc9P09633 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hoxc9P09633 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Hoxc9P09633 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Hoxc9P09633 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hoxc9P09633 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC15.46■□□□□ 0.07
Hoxc9P09633 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Hoxc9P09633 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hoxc9P09633 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hoxc9P09633 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hoxc9P09633 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Hoxc9P09633 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Hoxc9P09633 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC15.46■□□□□ 0.07
Hoxc9P09633 Gm23218-201ENSMUST00000158124 276 ntBASIC15.46■□□□□ 0.07
Hoxc9P09633 Mir6407-201ENSMUST00000184510 101 ntBASIC15.46■□□□□ 0.07
Hoxc9P09633 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Hoxc9P09633 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC15.46■□□□□ 0.07
Hoxc9P09633 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC15.46■□□□□ 0.07
Hoxc9P09633 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Hoxc9P09633 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hoxc9P09633 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC15.46■□□□□ 0.07
Hoxc9P09633 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hoxc9P09633 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Hoxc9P09633 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Hoxc9P09633 Gm17213-201ENSMUST00000165161 1360 ntBASIC15.46■□□□□ 0.07
Hoxc9P09633 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Hoxc9P09633 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Hoxc9P09633 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hoxc9P09633 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Hoxc9P09633 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Hoxc9P09633 Gm6655-201ENSMUST00000201932 1309 ntBASIC15.45■□□□□ 0.06
Hoxc9P09633 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hoxc9P09633 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hoxc9P09633 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hoxc9P09633 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Hoxc9P09633 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Hoxc9P09633 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hoxc9P09633 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hoxc9P09633 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hoxc9P09633 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 133.2 ms