Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.37□□□□□ -0.59
ApoeP08226 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
ApoeP08226 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.36□□□□□ -0.59
ApoeP08226 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.36□□□□□ -0.59
ApoeP08226 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.36□□□□□ -0.59
ApoeP08226 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.36□□□□□ -0.59
ApoeP08226 Gm11814-201ENSMUST00000119515 929 ntBASIC11.36□□□□□ -0.59
ApoeP08226 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.36□□□□□ -0.59
ApoeP08226 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Gm6244-201ENSMUST00000178732 841 ntBASIC11.36□□□□□ -0.59
ApoeP08226 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
ApoeP08226 Gm8652-201ENSMUST00000181363 964 ntBASIC11.36□□□□□ -0.59
ApoeP08226 Gm27437-201ENSMUST00000183429 107 ntBASIC11.36□□□□□ -0.59
ApoeP08226 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
ApoeP08226 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.36□□□□□ -0.59
ApoeP08226 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.36□□□□□ -0.59
ApoeP08226 Gm17794-201ENSMUST00000220252 955 ntBASIC11.36□□□□□ -0.59
ApoeP08226 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.36□□□□□ -0.59
ApoeP08226 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
ApoeP08226 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
ApoeP08226 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
ApoeP08226 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
ApoeP08226 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
ApoeP08226 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ApoeP08226 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
ApoeP08226 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
ApoeP08226 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 Gm24934-201ENSMUST00000103764 111 ntBASIC11.35□□□□□ -0.59
ApoeP08226 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.35□□□□□ -0.59
ApoeP08226 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 Gm12502-201ENSMUST00000120197 444 ntBASIC11.35□□□□□ -0.59
ApoeP08226 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.35□□□□□ -0.59
ApoeP08226 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.35□□□□□ -0.59
ApoeP08226 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 Gm5706-201ENSMUST00000181525 993 ntBASIC11.35□□□□□ -0.59
ApoeP08226 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.35□□□□□ -0.59
ApoeP08226 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.35□□□□□ -0.59
ApoeP08226 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
ApoeP08226 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
ApoeP08226 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
ApoeP08226 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.35□□□□□ -0.59
ApoeP08226 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.35□□□□□ -0.59
ApoeP08226 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
ApoeP08226 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
ApoeP08226 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
ApoeP08226 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.35□□□□□ -0.59
ApoeP08226 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms