Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
P06320 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC7.58□□□□□ -1.2
P06320 Gm15703-201ENSMUST00000120250 880 ntBASIC7.58□□□□□ -1.2
P06320 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC7.58□□□□□ -1.2
P06320 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC7.58□□□□□ -1.2
P06320 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 Gm6152-201ENSMUST00000151704 340 ntBASIC7.58□□□□□ -1.2
P06320 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC7.58□□□□□ -1.2
P06320 Gm6652-201ENSMUST00000186414 1070 ntBASIC7.58□□□□□ -1.2
P06320 Gm29667-201ENSMUST00000190817 490 ntBASIC7.58□□□□□ -1.2
P06320 Gm31326-201ENSMUST00000191856 1048 ntBASIC7.58□□□□□ -1.2
P06320 Gm44882-201ENSMUST00000205702 802 ntBASIC7.58□□□□□ -1.2
P06320 Gm44771-201ENSMUST00000206975 626 ntBASIC7.58□□□□□ -1.2
P06320 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC7.58□□□□□ -1.2
P06320 AC165260.3-202ENSMUST00000224550 1031 ntBASIC7.58□□□□□ -1.2
P06320 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
P06320 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC7.58□□□□□ -1.2
P06320 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC7.58□□□□□ -1.2
P06320 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 Gm38292-201ENSMUST00000192646 3045 ntBASIC7.58□□□□□ -1.2
P06320 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC7.58□□□□□ -1.2
P06320 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
P06320 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC7.58□□□□□ -1.2
P06320 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
P06320 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
P06320 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
P06320 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
P06320 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
P06320 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
P06320 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC7.57□□□□□ -1.2
P06320 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
P06320 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 Gm6992-201ENSMUST00000217973 1607 ntBASIC7.57□□□□□ -1.2
P06320 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 Gm19692-201ENSMUST00000203856 2084 ntBASIC7.57□□□□□ -1.2
P06320 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
P06320 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
P06320 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 Rmrp-201ENSMUST00000157463 271 ntBASIC7.57□□□□□ -1.2
P06320 Gm27838-201ENSMUST00000184829 128 ntBASIC7.57□□□□□ -1.2
P06320 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC7.57□□□□□ -1.2
P06320 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC7.57□□□□□ -1.2
P06320 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC7.57□□□□□ -1.2
P06320 Gm42929-201ENSMUST00000198374 1286 ntBASIC7.57□□□□□ -1.2
P06320 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
P06320 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC7.57□□□□□ -1.2
P06320 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC7.57□□□□□ -1.2
P06320 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 CT010486.3-201ENSMUST00000224555 811 ntBASIC7.57□□□□□ -1.2
P06320 AL732506.1-201ENSMUST00000226420 281 ntBASIC7.57□□□□□ -1.2
P06320 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
P06320 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC7.57□□□□□ -1.2
P06320 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC7.57□□□□□ -1.2
P06320 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
P06320 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms