Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gm27390-201ENSMUST00000184516 176 ntBASIC11.02□□□□□ -0.65
P01852 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P01852 Gm18056-201ENSMUST00000207670 568 ntBASIC11.02□□□□□ -0.65
P01852 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P01852 Gm18061-201ENSMUST00000208350 562 ntBASIC11.02□□□□□ -0.65
P01852 Gm18063-201ENSMUST00000208529 568 ntBASIC11.02□□□□□ -0.65
P01852 Gm18052-201ENSMUST00000208750 559 ntBASIC11.02□□□□□ -0.65
P01852 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P01852 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.02□□□□□ -0.65
P01852 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P01852 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P01852 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
P01852 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P01852 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P01852 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P01852 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P01852 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
P01852 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P01852 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P01852 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.02□□□□□ -0.65
P01852 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.02□□□□□ -0.65
P01852 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
P01852 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
P01852 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
P01852 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
P01852 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.01□□□□□ -0.65
P01852 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
P01852 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
P01852 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
P01852 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.01□□□□□ -0.65
P01852 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.01□□□□□ -0.65
P01852 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
P01852 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Gm13996-201ENSMUST00000118456 430 ntBASIC11.01□□□□□ -0.65
P01852 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
P01852 Gm14017-201ENSMUST00000121934 386 ntBASIC11.01□□□□□ -0.65
P01852 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.01□□□□□ -0.65
P01852 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.01□□□□□ -0.65
P01852 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.01□□□□□ -0.65
P01852 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.01□□□□□ -0.65
P01852 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.01□□□□□ -0.65
P01852 Gm45224-201ENSMUST00000208203 414 ntBASIC11.01□□□□□ -0.65
P01852 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.01□□□□□ -0.65
P01852 Gm18212-201ENSMUST00000211678 889 ntBASIC11.01□□□□□ -0.65
P01852 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
P01852 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Mir433-201ENSMUST00000093564 124 ntBASIC11.01□□□□□ -0.65
P01852 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
P01852 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.01□□□□□ -0.65
P01852 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P01852 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
P01852 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11□□□□□ -0.65
P01852 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
P01852 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
P01852 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11□□□□□ -0.65
P01852 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
P01852 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P01852 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11□□□□□ -0.65
P01852 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
P01852 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
P01852 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
P01852 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P01852 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11□□□□□ -0.65
P01852 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P01852 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11□□□□□ -0.65
P01852 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
P01852 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11□□□□□ -0.65
P01852 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11□□□□□ -0.65
P01852 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11□□□□□ -0.65
P01852 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11□□□□□ -0.65
P01852 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P01852 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11□□□□□ -0.65
P01852 Rprl1-201ENSMUST00000158050 327 ntBASIC11□□□□□ -0.65
P01852 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms