Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
TcraP01849 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
TcraP01849 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
TcraP01849 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
TcraP01849 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC8.77□□□□□ -1.01
TcraP01849 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC8.77□□□□□ -1.01
TcraP01849 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC8.76□□□□□ -1.01
TcraP01849 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
TcraP01849 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC8.76□□□□□ -1.01
TcraP01849 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC8.76□□□□□ -1.01
TcraP01849 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
TcraP01849 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC8.76□□□□□ -1.01
TcraP01849 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
TcraP01849 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
TcraP01849 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
TcraP01849 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC8.76□□□□□ -1.01
TcraP01849 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC8.76□□□□□ -1.01
TcraP01849 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
TcraP01849 Gm7488-201ENSMUST00000117148 684 ntBASIC8.76□□□□□ -1.01
TcraP01849 Gm13689-201ENSMUST00000119360 685 ntBASIC8.76□□□□□ -1.01
TcraP01849 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC8.76□□□□□ -1.01
TcraP01849 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC8.76□□□□□ -1.01
TcraP01849 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Auts2-212ENSMUST00000178555 309 ntBASIC8.76□□□□□ -1.01
TcraP01849 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
TcraP01849 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC8.76□□□□□ -1.01
TcraP01849 AC135669.1-201ENSMUST00000213585 412 ntBASIC8.76□□□□□ -1.01
TcraP01849 Gm5626-201ENSMUST00000222151 1058 ntBASIC8.76□□□□□ -1.01
TcraP01849 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
TcraP01849 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
TcraP01849 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC8.76□□□□□ -1.01
TcraP01849 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC8.76□□□□□ -1.01
TcraP01849 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Gm37447-201ENSMUST00000195625 2928 ntBASIC8.76□□□□□ -1.01
TcraP01849 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
TcraP01849 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
TcraP01849 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC8.76□□□□□ -1.01
TcraP01849 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
TcraP01849 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC8.75□□□□□ -1.01
TcraP01849 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
TcraP01849 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC8.75□□□□□ -1.01
TcraP01849 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC8.75□□□□□ -1.01
TcraP01849 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC8.75□□□□□ -1.01
TcraP01849 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC8.75□□□□□ -1.01
TcraP01849 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC8.75□□□□□ -1.01
TcraP01849 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
TcraP01849 AC121870.2-201ENSMUST00000214343 1870 ntBASIC8.75□□□□□ -1.01
TcraP01849 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
TcraP01849 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
TcraP01849 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC8.75□□□□□ -1.01
TcraP01849 Gm12539-201ENSMUST00000121549 1098 ntBASIC8.75□□□□□ -1.01
TcraP01849 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms