Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC15.3■□□□□ 0.04
Ubr1O70481 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubr1O70481 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC15.3■□□□□ 0.04
Ubr1O70481 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubr1O70481 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC15.3■□□□□ 0.04
Ubr1O70481 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ubr1O70481 Gm44323-201ENSMUST00000198689 129 ntBASIC15.3■□□□□ 0.04
Ubr1O70481 Gm44552-201ENSMUST00000205458 1247 ntBASIC15.3■□□□□ 0.04
Ubr1O70481 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ubr1O70481 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC15.3■□□□□ 0.04
Ubr1O70481 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Ubr1O70481 CT009757.3-201ENSMUST00000223367 2320 ntBASIC15.3■□□□□ 0.04
Ubr1O70481 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubr1O70481 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ubr1O70481 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ubr1O70481 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubr1O70481 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ubr1O70481 Gm20554-201ENSMUST00000177421 2352 ntBASIC15.3■□□□□ 0.04
Ubr1O70481 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubr1O70481 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ubr1O70481 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubr1O70481 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ubr1O70481 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ubr1O70481 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubr1O70481 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubr1O70481 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubr1O70481 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC15.29■□□□□ 0.04
Ubr1O70481 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ubr1O70481 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ubr1O70481 Gm26976-201ENSMUST00000182929 908 ntBASIC15.29■□□□□ 0.04
Ubr1O70481 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC15.29■□□□□ 0.04
Ubr1O70481 Gm43692-201ENSMUST00000198236 1062 ntBASIC15.29■□□□□ 0.04
Ubr1O70481 Gm45856-201ENSMUST00000212752 416 ntBASIC15.29■□□□□ 0.04
Ubr1O70481 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ubr1O70481 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC15.29■□□□□ 0.04
Ubr1O70481 AC159002.1-201ENSMUST00000226714 924 ntBASIC15.29■□□□□ 0.04
Ubr1O70481 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ubr1O70481 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubr1O70481 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubr1O70481 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubr1O70481 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubr1O70481 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubr1O70481 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubr1O70481 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubr1O70481 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubr1O70481 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ubr1O70481 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ubr1O70481 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubr1O70481 Gm6653-201ENSMUST00000218063 1288 ntBASIC15.29■□□□□ 0.04
Ubr1O70481 AC153152.3-201ENSMUST00000222188 1135 ntBASIC15.29■□□□□ 0.04
Ubr1O70481 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ubr1O70481 CT025602.2-201ENSMUST00000226553 772 ntBASIC15.29■□□□□ 0.04
Ubr1O70481 Gm5468-202ENSMUST00000227851 682 ntBASIC15.29■□□□□ 0.04
Ubr1O70481 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ubr1O70481 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC15.28■□□□□ 0.04
Ubr1O70481 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ubr1O70481 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC15.28■□□□□ 0.04
Ubr1O70481 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC15.28■□□□□ 0.04
Ubr1O70481 Gm18201-201ENSMUST00000174735 875 ntBASIC15.28■□□□□ 0.04
Ubr1O70481 Gm4895-201ENSMUST00000181646 1137 ntBASIC15.28■□□□□ 0.04
Ubr1O70481 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Gm5599-201ENSMUST00000209602 788 ntBASIC15.28■□□□□ 0.04
Ubr1O70481 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC15.28■□□□□ 0.04
Ubr1O70481 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ubr1O70481 Gm42943-201ENSMUST00000199676 3242 ntBASIC15.28■□□□□ 0.04
Ubr1O70481 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ubr1O70481 AC154517.2-201ENSMUST00000220829 2458 ntBASIC15.28■□□□□ 0.04
Ubr1O70481 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ubr1O70481 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ubr1O70481 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ubr1O70481 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ubr1O70481 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ubr1O70481 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ubr1O70481 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms