Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Efnb3O35393 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC9.5□□□□□ -0.89
Efnb3O35393 Gm29705-201ENSMUST00000212598 474 ntBASIC9.5□□□□□ -0.89
Efnb3O35393 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Gm26232-201ENSMUST00000083360 166 ntBASIC9.5□□□□□ -0.89
Efnb3O35393 Rnu1b6-201ENSMUST00000083839 166 ntBASIC9.5□□□□□ -0.89
Efnb3O35393 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Efnb3O35393 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC9.5□□□□□ -0.89
Efnb3O35393 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
Efnb3O35393 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC9.5□□□□□ -0.89
Efnb3O35393 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC9.49□□□□□ -0.89
Efnb3O35393 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Efnb3O35393 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Efnb3O35393 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Efnb3O35393 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.49□□□□□ -0.89
Efnb3O35393 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Efnb3O35393 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Zscan30-202ENSMUST00000224144 1458 ntBASIC9.49□□□□□ -0.89
Efnb3O35393 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Efnb3O35393 Gm12390-201ENSMUST00000117897 397 ntBASIC9.49□□□□□ -0.89
Efnb3O35393 Gm13829-201ENSMUST00000119600 138 ntBASIC9.49□□□□□ -0.89
Efnb3O35393 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Efnb3O35393 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC9.49□□□□□ -0.89
Efnb3O35393 Gm4271-201ENSMUST00000174444 973 ntBASIC9.49□□□□□ -0.89
Efnb3O35393 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Gm29127-201ENSMUST00000188304 517 ntBASIC9.49□□□□□ -0.89
Efnb3O35393 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC9.49□□□□□ -0.89
Efnb3O35393 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.49□□□□□ -0.89
Efnb3O35393 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.49□□□□□ -0.89
Efnb3O35393 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC9.49□□□□□ -0.89
Efnb3O35393 Gm6266-201ENSMUST00000203844 806 ntBASIC9.49□□□□□ -0.89
Efnb3O35393 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
Efnb3O35393 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 AC155237.1-201ENSMUST00000226196 1279 ntBASIC9.49□□□□□ -0.89
Efnb3O35393 AC126253.1-202ENSMUST00000226732 835 ntBASIC9.49□□□□□ -0.89
Efnb3O35393 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Efnb3O35393 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.49□□□□□ -0.89
Efnb3O35393 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Efnb3O35393 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Efnb3O35393 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Efnb3O35393 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Efnb3O35393 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Efnb3O35393 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Efnb3O35393 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC9.48□□□□□ -0.89
Efnb3O35393 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Efnb3O35393 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms