Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Gm12036-201ENSMUST00000120008 530 ntBASIC14.49□□□□□ -0.09
NpcdF8VQB8 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.49□□□□□ -0.09
NpcdF8VQB8 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Gm17798-201ENSMUST00000182282 1035 ntBASIC14.49□□□□□ -0.09
NpcdF8VQB8 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.49□□□□□ -0.09
NpcdF8VQB8 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC14.49□□□□□ -0.09
NpcdF8VQB8 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Lgi3-203ENSMUST00000226548 1001 ntBASIC14.49□□□□□ -0.09
NpcdF8VQB8 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NpcdF8VQB8 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Gm24231-201ENSMUST00000104315 133 ntBASIC14.48□□□□□ -0.09
NpcdF8VQB8 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Gm7722-201ENSMUST00000120646 741 ntBASIC14.48□□□□□ -0.09
NpcdF8VQB8 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Gm22146-201ENSMUST00000157397 288 ntBASIC14.48□□□□□ -0.09
NpcdF8VQB8 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
NpcdF8VQB8 AC102368.1-201ENSMUST00000227161 892 ntBASIC14.48□□□□□ -0.09
NpcdF8VQB8 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Gm44056-201ENSMUST00000204623 1427 ntBASIC14.48□□□□□ -0.09
NpcdF8VQB8 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NpcdF8VQB8 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NpcdF8VQB8 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.47□□□□□ -0.09
NpcdF8VQB8 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Gm5434-202ENSMUST00000222384 1451 ntBASIC14.47□□□□□ -0.09
NpcdF8VQB8 Gm5434-201ENSMUST00000071825 1451 ntBASIC14.47□□□□□ -0.09
NpcdF8VQB8 Gm24791-201ENSMUST00000104284 131 ntBASIC14.47□□□□□ -0.09
NpcdF8VQB8 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Gm12579-201ENSMUST00000118040 783 ntBASIC14.47□□□□□ -0.09
NpcdF8VQB8 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms