Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Gm37744-201ENSMUST00000194616 1590 ntBASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Gm8420-201ENSMUST00000097103 598 ntBASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Gm24934-201ENSMUST00000103764 111 ntBASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Gm11439-201ENSMUST00000118598 409 ntBASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Gm14247-201ENSMUST00000120950 237 ntBASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Gm1335-201ENSMUST00000121653 386 ntBASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Gm42693-201ENSMUST00000196779 631 ntBASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms