Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm28302-201ENSMUST00000187931 697 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Gm28646-201ENSMUST00000188220 697 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Gm28205-201ENSMUST00000189177 697 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Gm29032-201ENSMUST00000189797 697 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Gm28695-201ENSMUST00000190300 697 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Gm37448-201ENSMUST00000192795 697 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Gm37666-201ENSMUST00000194110 866 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Gm7003-201ENSMUST00000195089 312 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 AY036118-201ENSMUST00000200021 923 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Gm9257-201ENSMUST00000221254 232 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Gm45186-201ENSMUST00000206874 478 ntBASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Gm17827-201ENSMUST00000211825 742 ntBASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cpsf4lE9Q2N0 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cpsf4lE9Q2N0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.15□□□□□ -0.79
Cpsf4lE9Q2N0 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cpsf4lE9Q2N0 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cpsf4lE9Q2N0 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Cpsf4lE9Q2N0 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms