Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Btg4-201ENSMUST00000114431 1486 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC6.48□□□□□ -1.37
Herc1E9PZP8 Gm5398-201ENSMUST00000121933 984 ntBASIC6.48□□□□□ -1.37
Herc1E9PZP8 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC6.48□□□□□ -1.37
Herc1E9PZP8 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Gm28671-201ENSMUST00000187036 692 ntBASIC6.48□□□□□ -1.37
Herc1E9PZP8 Gm37723-201ENSMUST00000194480 565 ntBASIC6.48□□□□□ -1.37
Herc1E9PZP8 Gm44767-201ENSMUST00000206634 469 ntTSL 5 BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Gm2553-201ENSMUST00000215986 605 ntBASIC6.48□□□□□ -1.37
Herc1E9PZP8 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC6.48□□□□□ -1.37
Herc1E9PZP8 AC163351.1-201ENSMUST00000225539 737 ntBASIC6.48□□□□□ -1.37
Herc1E9PZP8 Klk4-201ENSMUST00000007161 1249 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Gm32072-201ENSMUST00000200803 1434 ntBASIC6.48□□□□□ -1.37
Herc1E9PZP8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Gm37795-201ENSMUST00000194216 2459 ntBASIC6.48□□□□□ -1.37
Herc1E9PZP8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Gm9434-201ENSMUST00000118975 813 ntBASIC6.48□□□□□ -1.37
Herc1E9PZP8 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC6.48□□□□□ -1.37
Herc1E9PZP8 Gm3828-201ENSMUST00000121817 257 ntBASIC6.48□□□□□ -1.37
Herc1E9PZP8 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Gm44716-201ENSMUST00000209007 710 ntBASIC6.48□□□□□ -1.37
Herc1E9PZP8 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Dcstamp-205ENSMUST00000228556 1684 ntBASIC6.48□□□□□ -1.37
Herc1E9PZP8 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Gm37728-201ENSMUST00000195025 2292 ntBASIC6.48□□□□□ -1.37
Herc1E9PZP8 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 AC102569.1-201ENSMUST00000221563 685 ntBASIC6.48□□□□□ -1.37
Herc1E9PZP8 AC160931.1-201ENSMUST00000223298 413 ntTSL 3 BASIC6.48□□□□□ -1.37
Herc1E9PZP8 AC125019.1-201ENSMUST00000224809 908 ntBASIC6.48□□□□□ -1.37
Herc1E9PZP8 AC129590.1-201ENSMUST00000225573 852 ntBASIC6.48□□□□□ -1.37
Herc1E9PZP8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Herc1E9PZP8 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Herc1E9PZP8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Herc1E9PZP8 4933439K11Rik-202ENSMUST00000140307 941 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Herc1E9PZP8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC6.47□□□□□ -1.37
Herc1E9PZP8 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Gm5432-201ENSMUST00000180759 1670 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Gm7158-201ENSMUST00000120079 903 ntBASIC6.47□□□□□ -1.37
Herc1E9PZP8 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Gm42915-201ENSMUST00000197478 323 ntBASIC6.47□□□□□ -1.37
Herc1E9PZP8 Gm7997-201ENSMUST00000210546 980 ntBASIC6.47□□□□□ -1.37
Herc1E9PZP8 CT009515.1-201ENSMUST00000228127 586 ntBASIC6.47□□□□□ -1.37
Herc1E9PZP8 Rab3b-201ENSMUST00000003502 1053 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Herc1E9PZP8 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC6.47□□□□□ -1.37
Herc1E9PZP8 Gm44740-201ENSMUST00000205603 1614 ntBASIC6.47□□□□□ -1.37
Herc1E9PZP8 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Gm44629-201ENSMUST00000206951 1840 ntBASIC6.47□□□□□ -1.37
Herc1E9PZP8 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Herc1E9PZP8 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms