Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a3E9PWQ3 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a3E9PWQ3 Gm24146-201ENSMUST00000082760 321 ntBASIC11.62□□□□□ -0.55
Col6a3E9PWQ3 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Col6a3E9PWQ3 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Col6a3E9PWQ3 Mir683-2-201ENSMUST00000102099 109 ntBASIC11.62□□□□□ -0.55
Col6a3E9PWQ3 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a3E9PWQ3 Gm17147-201ENSMUST00000164176 432 ntBASIC11.62□□□□□ -0.55
Col6a3E9PWQ3 Gm20616-201ENSMUST00000177262 716 ntTSL 3 BASIC11.62□□□□□ -0.55
Col6a3E9PWQ3 Mir683-1-201ENSMUST00000179371 109 ntBASIC11.62□□□□□ -0.55
Col6a3E9PWQ3 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC11.62□□□□□ -0.55
Col6a3E9PWQ3 Gm5845-201ENSMUST00000195812 796 ntBASIC11.62□□□□□ -0.55
Col6a3E9PWQ3 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.62□□□□□ -0.55
Col6a3E9PWQ3 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC11.62□□□□□ -0.55
Col6a3E9PWQ3 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.62□□□□□ -0.55
Col6a3E9PWQ3 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a3E9PWQ3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a3E9PWQ3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a3E9PWQ3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a3E9PWQ3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Col6a3E9PWQ3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Gm37597-201ENSMUST00000191853 382 ntBASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Gm8828-201ENSMUST00000196786 1290 ntBASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Gm43965-201ENSMUST00000203779 789 ntBASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Gm13071-201ENSMUST00000122237 376 ntBASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 AC140314.1-201ENSMUST00000219549 554 ntBASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Gm18783-201ENSMUST00000220465 1151 ntBASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Gm5468-202ENSMUST00000227851 682 ntBASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Gm5278-201ENSMUST00000055957 552 ntBASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Gm8725-201ENSMUST00000221829 1333 ntBASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Gm6939-201ENSMUST00000122029 864 ntBASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 AC163038.2-201ENSMUST00000224851 650 ntBASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a3E9PWQ3 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Gm4294-201ENSMUST00000105169 614 ntBASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Gm14148-201ENSMUST00000122433 1008 ntBASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Gm38063-201ENSMUST00000193990 342 ntBASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Prpf18-204ENSMUST00000152362 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Gm37284-201ENSMUST00000193607 539 ntBASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Gm6794-201ENSMUST00000203829 457 ntBASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a3E9PWQ3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms