Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.91□□□□□ -0.34
Clca3bE9PUL3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Mir3102-201ENSMUST00000175555 104 ntBASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Mir6979-201ENSMUST00000183927 56 ntBASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Gm9555-201ENSMUST00000200908 583 ntBASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.91□□□□□ -0.34
Clca3bE9PUL3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
Clca3bE9PUL3 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Gm11941-201ENSMUST00000119904 610 ntBASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Gm23699-201ENSMUST00000158835 135 ntBASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Gm38117-201ENSMUST00000194653 939 ntBASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clca3bE9PUL3 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Clca3bE9PUL3 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Gm23251-201ENSMUST00000103773 110 ntBASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Gm11663-201ENSMUST00000117888 290 ntBASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Gm13045-201ENSMUST00000119019 712 ntBASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms