Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.78□□□□□ -0.68
Shank1D3YZU1 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.78□□□□□ -0.68
Shank1D3YZU1 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Gm3551-201ENSMUST00000190750 664 ntBASIC10.78□□□□□ -0.68
Shank1D3YZU1 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Shank1D3YZU1 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.78□□□□□ -0.68
Shank1D3YZU1 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.78□□□□□ -0.68
Shank1D3YZU1 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shank1D3YZU1 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Shank1D3YZU1 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Shank1D3YZU1 Gm11663-201ENSMUST00000117888 290 ntBASIC10.77□□□□□ -0.68
Shank1D3YZU1 Gm12030-201ENSMUST00000121917 223 ntBASIC10.77□□□□□ -0.68
Shank1D3YZU1 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.77□□□□□ -0.68
Shank1D3YZU1 Gm22877-201ENSMUST00000175451 105 ntBASIC10.77□□□□□ -0.68
Shank1D3YZU1 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC10.77□□□□□ -0.68
Shank1D3YZU1 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.77□□□□□ -0.68
Shank1D3YZU1 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Shank1D3YZU1 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Shank1D3YZU1 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Shank1D3YZU1 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
Shank1D3YZU1 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Shank1D3YZU1 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Shank1D3YZU1 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Shank1D3YZU1 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Shank1D3YZU1 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Shank1D3YZU1 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Mir671-201ENSMUST00000102432 98 ntBASIC10.77□□□□□ -0.69
Shank1D3YZU1 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Gm25076-201ENSMUST00000104098 132 ntBASIC10.77□□□□□ -0.69
Shank1D3YZU1 Gm4862-201ENSMUST00000170405 438 ntBASIC10.77□□□□□ -0.69
Shank1D3YZU1 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Gm3017-201ENSMUST00000203603 1126 ntBASIC10.77□□□□□ -0.69
Shank1D3YZU1 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Shank1D3YZU1 AC126799.1-201ENSMUST00000221976 246 ntBASIC10.77□□□□□ -0.69
Shank1D3YZU1 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Shank1D3YZU1 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Gm5434-202ENSMUST00000222384 1451 ntBASIC10.77□□□□□ -0.69
Shank1D3YZU1 Gm5434-201ENSMUST00000071825 1451 ntBASIC10.77□□□□□ -0.69
Shank1D3YZU1 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Gm37859-201ENSMUST00000195529 2173 ntBASIC10.77□□□□□ -0.69
Shank1D3YZU1 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Shank1D3YZU1 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms