Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Chd6A3KFM7 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Chd6A3KFM7 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Chd6A3KFM7 AC164556.1-201ENSMUST00000221318 751 ntBASIC9.66□□□□□ -0.86
Chd6A3KFM7 AC154433.1-201ENSMUST00000224401 1183 ntBASIC9.66□□□□□ -0.86
Chd6A3KFM7 Gm4778-201ENSMUST00000098878 1098 ntBASIC9.66□□□□□ -0.86
Chd6A3KFM7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd6A3KFM7 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd6A3KFM7 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd6A3KFM7 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd6A3KFM7 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd6A3KFM7 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd6A3KFM7 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC9.66□□□□□ -0.86
Chd6A3KFM7 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Chd6A3KFM7 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd6A3KFM7 Gm15207-201ENSMUST00000119259 442 ntBASIC9.66□□□□□ -0.86
Chd6A3KFM7 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Chd6A3KFM7 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Chd6A3KFM7 Gm43117-201ENSMUST00000198531 379 ntBASIC9.66□□□□□ -0.86
Chd6A3KFM7 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd6A3KFM7 Gm42689-201ENSMUST00000202403 404 ntBASIC9.66□□□□□ -0.86
Chd6A3KFM7 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Chd6A3KFM7 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC9.66□□□□□ -0.86
Chd6A3KFM7 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC9.66□□□□□ -0.86
Chd6A3KFM7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd6A3KFM7 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Chd6A3KFM7 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd6A3KFM7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd6A3KFM7 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Chd6A3KFM7 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC9.65□□□□□ -0.86
Chd6A3KFM7 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Chd6A3KFM7 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Gm25492-201ENSMUST00000157383 129 ntBASIC9.65□□□□□ -0.86
Chd6A3KFM7 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Chd6A3KFM7 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Chd6A3KFM7 AC164614.1-201ENSMUST00000216038 397 ntBASIC9.65□□□□□ -0.86
Chd6A3KFM7 Gm7242-201ENSMUST00000221134 705 ntBASIC9.65□□□□□ -0.86
Chd6A3KFM7 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Chd6A3KFM7 CT025610.1-201ENSMUST00000224552 1786 ntBASIC9.65□□□□□ -0.86
Chd6A3KFM7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Gm38246-201ENSMUST00000194318 1511 ntBASIC9.65□□□□□ -0.86
Chd6A3KFM7 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Gm13426-201ENSMUST00000117887 795 ntBASIC9.65□□□□□ -0.86
Chd6A3KFM7 Gm14497-201ENSMUST00000119537 580 ntBASIC9.65□□□□□ -0.86
Chd6A3KFM7 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Gm4895-201ENSMUST00000181646 1137 ntBASIC9.65□□□□□ -0.86
Chd6A3KFM7 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chd6A3KFM7 Gm45090-201ENSMUST00000208775 1148 ntBASIC9.65□□□□□ -0.86
Chd6A3KFM7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Chd6A3KFM7 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Chd6A3KFM7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Chd6A3KFM7 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Chd6A3KFM7 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Chd6A3KFM7 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Chd6A3KFM7 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Chd6A3KFM7 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Chd6A3KFM7 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Chd6A3KFM7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC9.64□□□□□ -0.87
Chd6A3KFM7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC9.64□□□□□ -0.87
Chd6A3KFM7 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC9.64□□□□□ -0.87
Chd6A3KFM7 Gm14048-201ENSMUST00000121864 1268 ntBASIC9.64□□□□□ -0.87
Chd6A3KFM7 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms