Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc194A0A140LIT1 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.96□□□□□ -0.5
Ccdc194A0A140LIT1 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc194A0A140LIT1 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc194A0A140LIT1 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc194A0A140LIT1 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.96□□□□□ -0.5
Ccdc194A0A140LIT1 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc194A0A140LIT1 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Ccdc194A0A140LIT1 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc194A0A140LIT1 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc194A0A140LIT1 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Gm4986-201ENSMUST00000119731 549 ntBASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Gm5745-201ENSMUST00000183748 313 ntBASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Gm43133-201ENSMUST00000197472 463 ntBASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Gm9996-201ENSMUST00000070359 913 ntBASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc194A0A140LIT1 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Gm22018-201ENSMUST00000104357 131 ntBASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms