Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Phf1Q9Z1B8 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Phf1Q9Z1B8 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Phf1Q9Z1B8 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Phf1Q9Z1B8 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Phf1Q9Z1B8 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Phf1Q9Z1B8 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Phf1Q9Z1B8 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Phf1Q9Z1B8 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Gm23119-201ENSMUST00000158610 140 ntBASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Gm37986-201ENSMUST00000193285 383 ntBASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Gm8385-201ENSMUST00000058999 643 ntBASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Map1b-203ENSMUST00000223725 2669 ntBASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.11□□□□□ -0.63
Phf1Q9Z1B8 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Gm13296-201ENSMUST00000117854 997 ntBASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Gm28450-201ENSMUST00000187349 638 ntBASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Gm42997-202ENSMUST00000200321 985 ntBASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Gm19994-201ENSMUST00000217086 586 ntBASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Paupar-201ENSMUST00000194826 3482 ntBASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Phf1Q9Z1B8 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms