Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
U2af1Q9D883 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
U2af1Q9D883 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
U2af1Q9D883 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
U2af1Q9D883 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
U2af1Q9D883 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
U2af1Q9D883 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
U2af1Q9D883 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
U2af1Q9D883 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
U2af1Q9D883 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
U2af1Q9D883 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
U2af1Q9D883 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
U2af1Q9D883 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
U2af1Q9D883 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
U2af1Q9D883 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
U2af1Q9D883 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
U2af1Q9D883 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
U2af1Q9D883 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
U2af1Q9D883 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
U2af1Q9D883 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC15.79■□□□□ 0.12
U2af1Q9D883 Gm12857-201ENSMUST00000117678 592 ntBASIC15.79■□□□□ 0.12
U2af1Q9D883 Gm12501-201ENSMUST00000119163 529 ntBASIC15.79■□□□□ 0.12
U2af1Q9D883 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC15.79■□□□□ 0.12
U2af1Q9D883 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC15.79■□□□□ 0.12
U2af1Q9D883 Cd63-ps-202ENSMUST00000154992 717 ntBASIC15.79■□□□□ 0.12
U2af1Q9D883 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC15.79■□□□□ 0.12
U2af1Q9D883 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
U2af1Q9D883 Abhd11os-203ENSMUST00000222613 363 ntBASIC15.79■□□□□ 0.12
U2af1Q9D883 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
U2af1Q9D883 Mir219a-1-201ENSMUST00000083621 110 ntBASIC15.79■□□□□ 0.12
U2af1Q9D883 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
U2af1Q9D883 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC15.79■□□□□ 0.12
U2af1Q9D883 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
U2af1Q9D883 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
U2af1Q9D883 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
U2af1Q9D883 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
U2af1Q9D883 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
U2af1Q9D883 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
U2af1Q9D883 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
U2af1Q9D883 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
U2af1Q9D883 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 AC091458.1-201ENSMUST00000220902 1361 ntBASIC15.78■□□□□ 0.12
U2af1Q9D883 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 Gm43807-201ENSMUST00000200678 1781 ntBASIC15.78■□□□□ 0.12
U2af1Q9D883 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
U2af1Q9D883 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC15.78■□□□□ 0.12
U2af1Q9D883 Gm14058-201ENSMUST00000116082 735 ntBASIC15.78■□□□□ 0.12
U2af1Q9D883 Gm13035-201ENSMUST00000117496 342 ntBASIC15.78■□□□□ 0.12
U2af1Q9D883 Gm11660-201ENSMUST00000120955 412 ntBASIC15.78■□□□□ 0.12
U2af1Q9D883 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC15.78■□□□□ 0.12
U2af1Q9D883 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC15.78■□□□□ 0.12
U2af1Q9D883 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 Gm38228-201ENSMUST00000193169 1293 ntBASIC15.78■□□□□ 0.12
U2af1Q9D883 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
U2af1Q9D883 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 AC154517.2-201ENSMUST00000220829 2458 ntBASIC15.78■□□□□ 0.12
U2af1Q9D883 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
U2af1Q9D883 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
U2af1Q9D883 Gm2238-201ENSMUST00000192074 3669 ntBASIC15.78■□□□□ 0.12
U2af1Q9D883 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
U2af1Q9D883 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
U2af1Q9D883 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
U2af1Q9D883 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
U2af1Q9D883 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
U2af1Q9D883 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
U2af1Q9D883 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
U2af1Q9D883 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC15.77■□□□□ 0.12
U2af1Q9D883 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
U2af1Q9D883 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC15.77■□□□□ 0.12
U2af1Q9D883 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
U2af1Q9D883 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
U2af1Q9D883 Gm43138-201ENSMUST00000199123 708 ntBASIC15.77■□□□□ 0.12
U2af1Q9D883 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC15.77■□□□□ 0.12
U2af1Q9D883 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
U2af1Q9D883 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
U2af1Q9D883 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
U2af1Q9D883 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
U2af1Q9D883 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
U2af1Q9D883 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
U2af1Q9D883 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms