Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Gm43962-201ENSMUST00000203898 190 ntBASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Gm7722-201ENSMUST00000120646 741 ntBASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Gm16570-201ENSMUST00000161951 436 ntBASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Gm16505-201ENSMUST00000179981 232 ntBASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.35□□□□□ -0.43
Vps28Q9D1C8 AY036118-201ENSMUST00000200021 923 ntBASIC12.35□□□□□ -0.43
Vps28Q9D1C8 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps28Q9D1C8 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps28Q9D1C8 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Vps28Q9D1C8 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps28Q9D1C8 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Vps28Q9D1C8 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps28Q9D1C8 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps28Q9D1C8 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps28Q9D1C8 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
Vps28Q9D1C8 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps28Q9D1C8 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps28Q9D1C8 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.34□□□□□ -0.43
Vps28Q9D1C8 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.34□□□□□ -0.43
Vps28Q9D1C8 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.34□□□□□ -0.43
Vps28Q9D1C8 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps28Q9D1C8 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.34□□□□□ -0.43
Vps28Q9D1C8 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps28Q9D1C8 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.34□□□□□ -0.43
Vps28Q9D1C8 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.34□□□□□ -0.43
Vps28Q9D1C8 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps28Q9D1C8 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Vps28Q9D1C8 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.34□□□□□ -0.43
Vps28Q9D1C8 Gm18730-201ENSMUST00000218038 343 ntBASIC12.34□□□□□ -0.43
Vps28Q9D1C8 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.34□□□□□ -0.43
Vps28Q9D1C8 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms