Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.38□□□□□ -0.59
Upk1aQ9D132 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk1aQ9D132 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.37□□□□□ -0.59
Upk1aQ9D132 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Gm24934-201ENSMUST00000103764 111 ntBASIC11.37□□□□□ -0.59
Upk1aQ9D132 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Gm8738-201ENSMUST00000172606 329 ntBASIC11.37□□□□□ -0.59
Upk1aQ9D132 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.37□□□□□ -0.59
Upk1aQ9D132 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Gm10254-201ENSMUST00000052888 867 ntBASIC11.37□□□□□ -0.59
Upk1aQ9D132 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Upk1aQ9D132 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Upk1aQ9D132 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.36□□□□□ -0.59
Upk1aQ9D132 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Upk1aQ9D132 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.36□□□□□ -0.59
Upk1aQ9D132 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.36□□□□□ -0.59
Upk1aQ9D132 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.36□□□□□ -0.59
Upk1aQ9D132 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Rprl1-201ENSMUST00000158050 327 ntBASIC11.36□□□□□ -0.59
Upk1aQ9D132 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Upk1aQ9D132 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.36□□□□□ -0.59
Upk1aQ9D132 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Gm40466-201ENSMUST00000212174 422 ntBASIC11.36□□□□□ -0.59
Upk1aQ9D132 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.36□□□□□ -0.59
Upk1aQ9D132 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.36□□□□□ -0.59
Upk1aQ9D132 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.36□□□□□ -0.59
Upk1aQ9D132 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms