Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Gm7029-201ENSMUST00000173226 450 ntBASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Gm6244-201ENSMUST00000178732 841 ntBASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Gm8652-201ENSMUST00000181363 964 ntBASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Gm9908-201ENSMUST00000211534 448 ntBASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Gm22058-201ENSMUST00000083393 310 ntBASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Gm5356-201ENSMUST00000093326 615 ntBASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chaf1bQ9D0N7 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chaf1bQ9D0N7 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chaf1bQ9D0N7 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chaf1bQ9D0N7 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chaf1bQ9D0N7 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Chaf1bQ9D0N7 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Chaf1bQ9D0N7 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chaf1bQ9D0N7 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chaf1bQ9D0N7 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Chaf1bQ9D0N7 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chaf1bQ9D0N7 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chaf1bQ9D0N7 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.27□□□□□ -0.6
Chaf1bQ9D0N7 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Gm12502-201ENSMUST00000120197 444 ntBASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Gm23119-201ENSMUST00000158610 140 ntBASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Gm4271-201ENSMUST00000174444 973 ntBASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Gm6180-201ENSMUST00000065243 498 ntBASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Gm10012-201ENSMUST00000078252 192 ntBASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chaf1bQ9D0N7 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chaf1bQ9D0N7 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Chaf1bQ9D0N7 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Chaf1bQ9D0N7 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chaf1bQ9D0N7 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chaf1bQ9D0N7 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms