Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.15□□□□□ -0.46
Lsm7Q9CQQ8 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm7Q9CQQ8 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lsm7Q9CQQ8 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lsm7Q9CQQ8 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Gm11509-201ENSMUST00000117358 325 ntBASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Gm11663-201ENSMUST00000117888 290 ntBASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Gm1821-202ENSMUST00000227415 750 ntBASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm7Q9CQQ8 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Gm13611-201ENSMUST00000118269 318 ntBASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Gm3786-201ENSMUST00000202659 378 ntBASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Gm19287-201ENSMUST00000203190 358 ntBASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Gm17931-201ENSMUST00000208132 634 ntBASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm7Q9CQQ8 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms